肉牛干物质采食量和呼吸速率在不同温度湿度指数水平上的表型可塑性和稳定性

IF 2.9 2区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE
William R Shaffer, Jorge Hidalgo, Nora M Bello, Rylie Noland, Jennifer Bormann, Robert L Weaber, Cashley M Ahlberg, Kelsey Bruno, Clint R Krehbiel, Michelle S Calvo-Lorenzo, Chris J Richards, Sara E Place, Udaya DeSilva, Larry A Kuehn, Megan M Rolf
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引用次数: 0

摘要

预期的气候变化保证了对能够在不同环境条件下表现一致的表型稳定牛种群的选择研究。在本研究中,我们利用异方差随机回归模型:1)表征干物质采食量(DMI)和呼吸速率(RR)相对于温度湿度指数(THI)的加性遗传和其他表型成分;2)通过确定沿观察到的THI范围内的加性遗传反应范数是否变化,以及通过评估不同THI值下DMI或RR之间的加性遗传相关性,评估基因型-环境相互作用(G×E)的存在。3)在THI范围内评估模型推导的估计育种值(EBV)的准确性。数据包括在70天内分别对788名和569名舵手进行DMI和RR的重复观察。利用贝叶斯推理,对每个性状拟合了具有主体特异性加性遗传效应和永久环境效应的层次模型。估计的种群斜率(以后中位数和95%最高后验密度(HPD)区间表示)在对数尺度上为THI每单位每天增加-0.046 (-0.053,-0.039)kg DMI, THI每单位增加0.027(0.026,0.029)次呼吸/ 30s (BP30S) RR,从而表明这两种性状的环境敏感性。DMI和RR的加性遗传截断距与斜率的估计相关性分别为-0.78(-0.86,-0.69)和-0.66(-1.0,-0.20),表明在热应激开始时选择DMI增加和RR降低与种群对THI的平均环境敏感性呈正相关。热应激开始时(即THI为70)DMI的遗传力估计在各队列中的范围为0.30(0.17,0.44)至0.37(0.20,0.48),但随着THI的增加而降低。遗传率估计的RR较低,95% HPD上限在THI评估范围内为0.03至0.08。对于DMI, 70和85 THI水平的中位加性遗传相关和70和85 THI水平下估计育种值的Spearman相关分别为0.42(0.26,0.57)和0.39(0.26,0.52),表明存在显著的G×E。在特定THI值下,DMI EBV模型的中位数精度从70 THI增加到82 THI时的0.65,并在该点稳定下来。这可能是因为在更大的THI上收集了更多的数据点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Beef cattle phenotypic plasticity and stability of dry matter intake and respiration rate across varying levels of temperature humidity index
Expected changes in climate warrant research on selection for a phenotypically stable cattle population that can perform consistently across diverse environmental conditions. In this study, we utilize a heteroscedastic random regression model to: 1) characterize the additive genetic and other phenotypic components of dry matter intake (DMI) and respiration rate (RR) with respect to the temperature humidity index (THI), 2) assess the presence of genotype-by-environment interactions (G×E) by determining whether the additive genetic reaction norm changes along the observed THI range and by evaluating the additive genetic correlations between DMI or RR at different THI values, and 3) evaluate model derived accuracy of estimated breeding values (EBV) along a range of THI. Data consisted of repeated observations of DMI and RR on 788 and 569 steers, respectively, over a period of 70d. A hierarchical model with subject-specific additive genetic and permanent environment effects was fitted to each trait using Bayesian inference. Estimated population slopes, expressed as posterior median and 95% highest posterior density (HPD) interval, were -0.046 (-0.053, -0.039) kg DMI per unit increase in THI per day and 0.027 (0.026, 0.029) breaths per 30s (BP30S) RR for each unit increase in THI on the logarithmic scale, thereby suggesting environmental sensitivity for both traits. Estimated correlations between the additive genetic intercept and slope were -0.78 (-0.86, -0.69) and -0.66 (-1.0, -0.20) for DMI and RR, respectively, indicating that selection for increased DMI and decreased RR at the onset of heat stress can be expected to associate positively with mean population environmental sensitivity to THI. Heritability estimates for DMI at the onset of heat stress (i.e., THI of 70) ranged from 0.30 (0.17, 0.44) to 0.37 (0.20, 0.48) across cohorts, but decreased as THI increased. Heritability estimates for RR were low, with 95% HPD upper boundaries ranging from 0.03 to 0.08 across the range of THI evaluated. For DMI, the median additive genetic correlation between 70 and 85 THI and the Spearman correlations between estimated breeding values at 70 and 85 THI levels were 0.42 (0.26, 0.57) and 0.39 (0.26, 0.52), respectively, indicating substantial G×E. The median DMI EBV model derived accuracy at a specific THI value increased from 70 THI to 0.65 at 82 THI, at which point it stabilized. This was likely because more data points were gathered at greater THI.
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来源期刊
Journal of animal science
Journal of animal science 农林科学-奶制品与动物科学
CiteScore
4.80
自引率
12.10%
发文量
1589
审稿时长
3 months
期刊介绍: The Journal of Animal Science (JAS) is the premier journal for animal science and serves as the leading source of new knowledge and perspective in this area. JAS publishes more than 500 fully reviewed research articles, invited reviews, technical notes, and letters to the editor each year. Articles published in JAS encompass a broad range of research topics in animal production and fundamental aspects of genetics, nutrition, physiology, and preparation and utilization of animal products. Articles typically report research with beef cattle, companion animals, goats, horses, pigs, and sheep; however, studies involving other farm animals, aquatic and wildlife species, and laboratory animal species that address fundamental questions related to livestock and companion animal biology will be considered for publication.
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