{"title":"肽热折叠成单个α-螺旋匝。","authors":"Erode N Prabhakaran, Ankur Kumar","doi":"10.1002/cbic.202500050","DOIUrl":null,"url":null,"abstract":"<p><p>Single α-helical turns (SαHT) are biorelevant peptide structures with potential applications in drug design. We envisioned augmented applications for thermal folding (T-folding) SαHT, wherein, a dynamic SαHT in equilibrium with non-helical conformers can be biased to favor SαHT by increasing the temperature. Short peptides cannot fold into native SαHT due to large conformational entropy. Covalent hydrogen bond surrogates (HBS) for the peptide H-bond have been designed to counter the entropy and enable such SαHT folds. Here, HBS-constrained SαHT are synthesized. NMR, CD spectral and computational analyses reveal their existence in a SαHT conformer which is in equilibrium with non-helical conformers. Temperature-dependent spectral analyses reveal their T-folding behaviour, the extent of which can be controlled by varying the number of Cα-substituents at the i+1st and i+2nd residues and solvent polarities. The conformational transition of the minor non-helical conformers to SαHT with increasing temperature, is at the origin of T-folding. T-folding molecules can uniquely serve as therapeutics with thermally augmentable potencies.</p>","PeriodicalId":140,"journal":{"name":"ChemBioChem","volume":" ","pages":"e202500050"},"PeriodicalIF":2.6000,"publicationDate":"2025-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Thermal Folding of Peptides into Single α-Helical Turns.\",\"authors\":\"Erode N Prabhakaran, Ankur Kumar\",\"doi\":\"10.1002/cbic.202500050\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Single α-helical turns (SαHT) are biorelevant peptide structures with potential applications in drug design. We envisioned augmented applications for thermal folding (T-folding) SαHT, wherein, a dynamic SαHT in equilibrium with non-helical conformers can be biased to favor SαHT by increasing the temperature. Short peptides cannot fold into native SαHT due to large conformational entropy. Covalent hydrogen bond surrogates (HBS) for the peptide H-bond have been designed to counter the entropy and enable such SαHT folds. Here, HBS-constrained SαHT are synthesized. NMR, CD spectral and computational analyses reveal their existence in a SαHT conformer which is in equilibrium with non-helical conformers. Temperature-dependent spectral analyses reveal their T-folding behaviour, the extent of which can be controlled by varying the number of Cα-substituents at the i+1st and i+2nd residues and solvent polarities. The conformational transition of the minor non-helical conformers to SαHT with increasing temperature, is at the origin of T-folding. T-folding molecules can uniquely serve as therapeutics with thermally augmentable potencies.</p>\",\"PeriodicalId\":140,\"journal\":{\"name\":\"ChemBioChem\",\"volume\":\" \",\"pages\":\"e202500050\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2025-04-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ChemBioChem\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1002/cbic.202500050\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ChemBioChem","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/cbic.202500050","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Thermal Folding of Peptides into Single α-Helical Turns.
Single α-helical turns (SαHT) are biorelevant peptide structures with potential applications in drug design. We envisioned augmented applications for thermal folding (T-folding) SαHT, wherein, a dynamic SαHT in equilibrium with non-helical conformers can be biased to favor SαHT by increasing the temperature. Short peptides cannot fold into native SαHT due to large conformational entropy. Covalent hydrogen bond surrogates (HBS) for the peptide H-bond have been designed to counter the entropy and enable such SαHT folds. Here, HBS-constrained SαHT are synthesized. NMR, CD spectral and computational analyses reveal their existence in a SαHT conformer which is in equilibrium with non-helical conformers. Temperature-dependent spectral analyses reveal their T-folding behaviour, the extent of which can be controlled by varying the number of Cα-substituents at the i+1st and i+2nd residues and solvent polarities. The conformational transition of the minor non-helical conformers to SαHT with increasing temperature, is at the origin of T-folding. T-folding molecules can uniquely serve as therapeutics with thermally augmentable potencies.
期刊介绍:
ChemBioChem (Impact Factor 2018: 2.641) publishes important breakthroughs across all areas at the interface of chemistry and biology, including the fields of chemical biology, bioorganic chemistry, bioinorganic chemistry, synthetic biology, biocatalysis, bionanotechnology, and biomaterials. It is published on behalf of Chemistry Europe, an association of 16 European chemical societies, and supported by the Asian Chemical Editorial Society (ACES).