从纳米尺度电极测量的胞吐瞬态时间常数中提取几何和输运参数。

IF 2.2 4区 生物学 Q3 BIOPHYSICS
Sundeep Kapila, Pradeep R Nair
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引用次数: 0

摘要

胞吐是神经和内分泌系统信息交换的基本过程。在各种技术中,囊泡冲击电化学细胞术(VIEC)已经成为一种利用纳米级电极模拟胞吐过程和测量内容转移动态信息的有效方法。在本文中,通过解析模型和大规模模拟,我们建立了VIEC单指数瞬态衰变时间常数(τ)的标度规律。具体来说,我们的结果预测了τ对几何参数和输运参数的幂律依赖性。该模型与探索VIEC相关参数空间的大规模模拟以及文献中的实验结果非常吻合。值得注意的是,这种基于物理的紧凑模型可以允许新的基于多特征的自一致策略来反向提取几何和传输参数,因此可以有助于更好的统计分析和理解胞吐瞬态和事件。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Extraction of geometric and transport parameters from the time constant of exocytosis transients measured by nanoscale electrodes.

Exocytosis is a fundamental process related to the information exchange in the nervous and endocrine system. Among the various techniques, vesicle impact electrochemical cytometry (VIEC) has emerged as an effective method to mimic the exocytosis process and measure dynamic information about content transfer using nanoscale electrodes. In this article, through analytical models and large scale simulations, we develop scaling laws for the decay time constant ( τ ) for VIEC single-exponential transients. Specifically, our results anticipate a power law dependence of τ on the geometric and the transport parameters. This model compares very well with large scale simulations exploring the parameter space relevant for VIEC and with experimental results from literature. Remarkably, such physics-based compact models could allow for novel multi-feature-based self consistent strategies for back extraction of geometric and transport parameters and hence could contribute towards better statistical analysis and understanding of exocytosis transients and events.

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来源期刊
European Biophysics Journal
European Biophysics Journal 生物-生物物理
CiteScore
4.30
自引率
0.00%
发文量
43
审稿时长
6-12 weeks
期刊介绍: The journal publishes papers in the field of biophysics, which is defined as the study of biological phenomena by using physical methods and concepts. Original papers, reviews and Biophysics letters are published. The primary goal of this journal is to advance the understanding of biological structure and function by application of the principles of physical science, and by presenting the work in a biophysical context. Papers employing a distinctively biophysical approach at all levels of biological organisation will be considered, as will both experimental and theoretical studies. The criteria for acceptance are scientific content, originality and relevance to biological systems of current interest and importance. Principal areas of interest include: - Structure and dynamics of biological macromolecules - Membrane biophysics and ion channels - Cell biophysics and organisation - Macromolecular assemblies - Biophysical methods and instrumentation - Advanced microscopics - System dynamics.
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