基于通用条形码基因区的卡尔斯省特有植物的分子鉴定

IF 2.2 Q3 GENETICS & HEREDITY
Asiye Uluğ , Funda Özdemir Değirmenci , Gül Esma Akdoğan
{"title":"基于通用条形码基因区的卡尔斯省特有植物的分子鉴定","authors":"Asiye Uluğ ,&nbsp;Funda Özdemir Değirmenci ,&nbsp;Gül Esma Akdoğan","doi":"10.1016/j.plgene.2025.100514","DOIUrl":null,"url":null,"abstract":"<div><div>Located in the highest and coldest region of north-eastern Türkiye, the province of Kars boasts a remarkable floral diversity, accounting for 16 % of the country's flora with 1615 plant species identified. This region represents the Caucasian lands of Türkiye and serves as a transition point between the Iranian-Turkish, European-Siberian and Mediterranean floral regions. Despite its considerable botanical wealth of the province, the flora of Kars Province remains poorly documented in the scientific literature. The aim of this research was to provide the molecular identity of 14 endemic plant species in the province using DNA-based methods. Three universal DNA barcode genes—<em>trnH-psbA</em> (non-coding spacer region), ribulose-1,5-bisphosphate carboxylase large subunit (<em>rbcL</em>), and maturase K (<em>matK</em>)—were sequenced to facilitate accurate identification. The endemic plant species were correctly identified to genus and species level based on the presence of the corresponding sequence of the investigated gene regions. By submitting 36 new barcodes to the NCBI database, this study contributes valuable genetic resources for future research in plant genetic studies. The findings highlight the potential of DNA barcoding to improve our understanding of plant diversity and to inform conservation efforts in the Caucasus region. The research not only contributes to our knowledge of Türkiye's plant diversity, but also advances the global discourse on genetic, taxonomic, ecological and biodiversity research dedicated to the conservation of endemic species in their natural habitats.</div></div>","PeriodicalId":38041,"journal":{"name":"Plant Gene","volume":"42 ","pages":"Article 100514"},"PeriodicalIF":2.2000,"publicationDate":"2025-04-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular identification of endemic plant species in Kars Province based on universal barcode gene regions\",\"authors\":\"Asiye Uluğ ,&nbsp;Funda Özdemir Değirmenci ,&nbsp;Gül Esma Akdoğan\",\"doi\":\"10.1016/j.plgene.2025.100514\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Located in the highest and coldest region of north-eastern Türkiye, the province of Kars boasts a remarkable floral diversity, accounting for 16 % of the country's flora with 1615 plant species identified. This region represents the Caucasian lands of Türkiye and serves as a transition point between the Iranian-Turkish, European-Siberian and Mediterranean floral regions. Despite its considerable botanical wealth of the province, the flora of Kars Province remains poorly documented in the scientific literature. The aim of this research was to provide the molecular identity of 14 endemic plant species in the province using DNA-based methods. Three universal DNA barcode genes—<em>trnH-psbA</em> (non-coding spacer region), ribulose-1,5-bisphosphate carboxylase large subunit (<em>rbcL</em>), and maturase K (<em>matK</em>)—were sequenced to facilitate accurate identification. The endemic plant species were correctly identified to genus and species level based on the presence of the corresponding sequence of the investigated gene regions. By submitting 36 new barcodes to the NCBI database, this study contributes valuable genetic resources for future research in plant genetic studies. The findings highlight the potential of DNA barcoding to improve our understanding of plant diversity and to inform conservation efforts in the Caucasus region. The research not only contributes to our knowledge of Türkiye's plant diversity, but also advances the global discourse on genetic, taxonomic, ecological and biodiversity research dedicated to the conservation of endemic species in their natural habitats.</div></div>\",\"PeriodicalId\":38041,\"journal\":{\"name\":\"Plant Gene\",\"volume\":\"42 \",\"pages\":\"Article 100514\"},\"PeriodicalIF\":2.2000,\"publicationDate\":\"2025-04-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Gene\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2352407325000253\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Gene","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2352407325000253","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

摘要

卡尔斯省位于基耶省东北部最高和最冷的地区,拥有非凡的植物多样性,占该国植物区系的16%,已确定的植物种类为1615种。这个地区代表了高加索地区的 rkiye,并作为伊朗-土耳其,欧洲-西伯利亚和地中海花卉地区之间的过渡点。尽管该省的植物资源丰富,但卡尔斯省的植物区系在科学文献中记载甚少。本研究的目的是利用基于dna的方法对省内14种特有植物进行分子鉴定。三个通用的DNA条形码基因- trnh - psba(非编码间隔区),核酮糖-1,5-二磷酸羧化酶大亚基(rbcL)和成熟酶K (matK) -进行测序,以方便准确鉴定。根据所调查基因区序列的存在,将特有植物正确地鉴定到属和种水平。通过向NCBI数据库提交36个新条形码,本研究为未来植物遗传研究提供了宝贵的遗传资源。这一发现强调了DNA条形码在提高我们对植物多样性的理解和为高加索地区的保护工作提供信息方面的潜力。这项研究不仅有助于我们对t rkiye植物多样性的了解,而且还推动了致力于保护自然栖息地特有物种的遗传、分类、生态和生物多样性研究的全球讨论。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular identification of endemic plant species in Kars Province based on universal barcode gene regions
Located in the highest and coldest region of north-eastern Türkiye, the province of Kars boasts a remarkable floral diversity, accounting for 16 % of the country's flora with 1615 plant species identified. This region represents the Caucasian lands of Türkiye and serves as a transition point between the Iranian-Turkish, European-Siberian and Mediterranean floral regions. Despite its considerable botanical wealth of the province, the flora of Kars Province remains poorly documented in the scientific literature. The aim of this research was to provide the molecular identity of 14 endemic plant species in the province using DNA-based methods. Three universal DNA barcode genes—trnH-psbA (non-coding spacer region), ribulose-1,5-bisphosphate carboxylase large subunit (rbcL), and maturase K (matK)—were sequenced to facilitate accurate identification. The endemic plant species were correctly identified to genus and species level based on the presence of the corresponding sequence of the investigated gene regions. By submitting 36 new barcodes to the NCBI database, this study contributes valuable genetic resources for future research in plant genetic studies. The findings highlight the potential of DNA barcoding to improve our understanding of plant diversity and to inform conservation efforts in the Caucasus region. The research not only contributes to our knowledge of Türkiye's plant diversity, but also advances the global discourse on genetic, taxonomic, ecological and biodiversity research dedicated to the conservation of endemic species in their natural habitats.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Plant Gene
Plant Gene Agricultural and Biological Sciences-Plant Science
CiteScore
4.50
自引率
0.00%
发文量
42
审稿时长
51 days
期刊介绍: Plant Gene publishes papers that focus on the regulation, expression, function and evolution of genes in plants, algae and other photosynthesizing organisms (e.g., cyanobacteria), and plant-associated microorganisms. Plant Gene strives to be a diverse plant journal and topics in multiple fields will be considered for publication. Although not limited to the following, some general topics include: Gene discovery and characterization, Gene regulation in response to environmental stress (e.g., salinity, drought, etc.), Genetic effects of transposable elements, Genetic control of secondary metabolic pathways and metabolic enzymes. Herbal Medicine - regulation and medicinal properties of plant products, Plant hormonal signaling, Plant evolutionary genetics, molecular evolution, population genetics, and phylogenetics, Profiling of plant gene expression and genetic variation, Plant-microbe interactions (e.g., influence of endophytes on gene expression; horizontal gene transfer studies; etc.), Agricultural genetics - biotechnology and crop improvement.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信