基于小组的血管性血友病基因测序的临床应用

IF 3.4 3区 医学 Q2 HEMATOLOGY
Radha Ramanan , Christine Van Laer , Sarissa Baert , Cyrielle Kint , Chris Van Geet , Quentin Van Thillo , Peter Verhamme , Thomas Vanassche , James D. McFadyen , Andrew C. Perkins , Huyen A. Tran , Veerle Labarque , Kathleen Freson
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引用次数: 0

摘要

血管性血友病(VWD)是最普遍的遗传性出血性疾病,具有广泛的致病变异。下一代测序(NGS)分析整个VWF基因,并提供其他基因的伴随评估,从而区分种族。方法:我们对所有确诊或疑似VWD的患者进行了单中心回顾性研究,这些患者采用基于小组的全外显子组测序(WES)筛查遗传性出血性疾病。测序前诊断采用实验室测量VWF活性和数量。测序后的诊断是通过变异管理与实验室测量相结合进行的。我们测量了基因测序前后诊断和分型的临床意义变化。结果纳入108例患者。人口主要由儿科患者组成。18岁(77/108,71%),女性(66/108,61%)。最大的测序前亚组是低VWF (n=61, 56%),其次是1型VWD (n=21, 19%)和2型无其他指定(NOS) (n=18, 17%)。19%(20/108)的研究人群发生了有临床意义的管理改变。在测序前2型组中效果最大(67%,16/24)。在测序前不能准确分型为2A/B/M/N的2型组(2型NOS)中,15/18(83%)的患者在测序后能够分型或得到不同的诊断。结论:在一个精心选择的队列中,特别是那些2型和3型VWD患者,基于小组的VWD测序在区分种族、指导治疗和计划生育方面具有临床意义。低VWF和1型VWD患者的测序很少改变治疗方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Clinical utility of panel-based genetic sequencing for von Willebrand disease

Introduction

Von Willebrand disease (VWD) is the most prevalent inherited bleeding disorder with a wide spectrum of causative variants. Next-generation sequencing (NGS) analyses the entire VWF gene and provides concomitant assessment of other genes allowing differentiation between genocopies.

Methods

We conducted a single-centre retrospective study of all patients with confirmed or suspected VWD who were screened with panel-based whole-exome sequencing (WES) for inherited bleeding disorders. Pre-sequencing diagnosis was performed using laboratory measures of VWF activity and quantity. Post-sequencing diagnosis was informed by variant curation in combination with laboratory measures. We measured clinically meaningful changes in the pre- vs post-genetic sequencing diagnosis and subtyping.

Results

The study included 108 patients. The population was predominantly composed of paediatric patients < 18 years old (77/108, 71%) and females (66/108, 61%). The largest pre-sequencing subgroup was those with low VWF (n=61, 56%), followed by type 1 VWD (n=21, 19%) and type 2 not otherwise specified (NOS) (n=18, 17%). A clinically meaningful change in management occurred in 19% (20/108) of the study population. The largest effect was seen in the pre-sequencing type 2 group (67%, 16/24). In the type 2 group who could not be accurately subtyped into 2A/B/M/N prior to sequencing (type 2 NOS), 15/18 (83%) were able to be subtyped or given a different diagnosis post sequencing.

Conclusion

Panel-based sequencing for VWD in a well-selected cohort, particularly those with type 2 and type 3 VWD, was clinically relevant in differentiating genocopies, directing therapies and family planning. Sequencing in those with low VWF and type 1 VWD rarely changed management.
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来源期刊
CiteScore
5.60
自引率
13.00%
发文量
212
审稿时长
7 weeks
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