导航“尖端雾”:拥抱尖端测量的不确定性。

IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY
Evolution Pub Date : 2025-04-02 DOI:10.1093/evolut/qpaf067
Jeremy M Beaulieu, Brian C O'Meara
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引用次数: 0

摘要

自然界充满了杂乱无章的变异,它们是进化的原材料。忽视这种变异不仅会削弱我们的分析能力,还有可能选择不准确的模型,产生错误的参数估计精度,并创造出人为的模式。此外,不确定性的复杂性超出了传统意义上的 "测量误差",包含了各种变异来源。为了解决这个问题,我们提出了 "尖端雾"(tip fog)一词来描述整体模型进化过程的值与记录值之间的差异,而不暗示特定的机制。我们通过展示 "尖端雾 "对连续比较模型和离散比较与多样化模型的影响,说明为什么考虑 "尖端雾 "仍然至关重要。我们重新提出了估算这种差异的方法,并通过模拟来评估其在比较中的可行性和重要性。我们的研究结果表明,忽略尖端雾会极大地影响速率估计的准确性,尖端雾水平越高,与真实速率的偏差越大,同时也会影响选择哪些模型。这些发现强调了模型选择的重要性和忽略尖端雾的潜在后果,为提高进化生物学比较方法的准确性提供了启示。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Navigating "tip fog": Embracing uncertainty in tip measurements.

Nature is full of messy variation, which serves as the raw material for evolution. Overlooking this variation not only weakens our analyses but also risks selecting inaccurate models, generating false precision in parameter estimates, and creating artificial patterns. Furthermore, the complexity of uncertainty extends beyond traditional "measurement error," encompassing various sources of variance. To address this, we propose the term "tip fog" to describe the variance between the value from the overall modeled evolutionary process and what is recorded, without implying a specific mechanism. We show why accounting for tip fog remains critical by showing its impact on continuous comparative models and discrete comparative and diversification models. We rederive methods to estimate this variance and use simulations to assess its feasibility and importance in a comparative context. Our findings reveal that ignoring tip fog substantially affects the accuracy of rate estimates, with higher tip fog levels showing greater biases from the true rates, as well as affecting which models are chosen. The findings underscore the importance of model selection and the potential consequences of neglecting tip fog, providing insights for improving the accuracy of comparative methods in evolutionary biology.

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来源期刊
Evolution
Evolution 环境科学-进化生物学
CiteScore
5.00
自引率
9.10%
发文量
0
审稿时长
3-6 weeks
期刊介绍: Evolution, published for the Society for the Study of Evolution, is the premier publication devoted to the study of organic evolution and the integration of the various fields of science concerned with evolution. The journal presents significant and original results that extend our understanding of evolutionary phenomena and processes.
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