从柽柳根际土壤中分离到的一种新的嗜盐细菌——巴库盐球菌(saliniccoccus bachuensis sp. nov.)。中国新疆巴楚县的植物

IF 2.3 3区 生物学 Q3 MICROBIOLOGY
Zhen-Pu Liang, Rui Wang, Han-Wen Cao, Xin-Lu Zhou, Jin-Ping Dai, Ping Su, Deepali Singh, Xiao-Xia Zhang
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引用次数: 0

摘要

从柽柳根际土壤中分离到菌株Bachu38T。中国新疆巴楚县的植物。该菌株的耐温范围为8 ~ 45℃(28℃为最佳),pH适应范围为7.0 ~ 10.0 (8.0 ~ 9.0),NaCl浓度耐受范围为2 ~ 20% (w/v),其中NaCl浓度为8%时生长最佳。细胞呈球形,革兰氏阳性,无运动,无鞭毛。生物化学鉴定显示氧化酶和过氧化氢酶活性均呈阳性反应。16S rRNA基因序列的系统发育分析表明,菌株Bachu38T在Salinicoccus属中形成一个独立的分支,与S. roseus DSM 5351 T(98.43%)和S. S. amylolyticus JC304T(98.29%)序列相似性最高。全基因组全长2.62 Mb, G + C含量为49.5%。与相关菌株相比,不同原核物种的平均核苷酸同源性(ANI)和数字DNA-DNA杂交(dDDH)值分别为71.34 ~ 90.99%和17.20 ~ 42.40%,均低于建议的物种鉴定阈值(ANI: 95 ~ 96%, dDDH: 70%)。呼吸道醌鉴定为MK-6,细胞壁肽聚糖类型为L-Lys-Gly5。脂肪酸分析表明,细胞脂肪酸主要为iso-C15:0和前iso-C15:0,各占总脂肪酸组成的10%以上。极性脂质谱由磷脂酰甘油(PG)、二磷脂酰甘油(DPG)、糖脂(GL)以及两种未识别的脂质(指定为UL1和UL2)组成。基于综合表型、生理生化特征的多相分类方法,以及综合系统发育和基因组分析,提出菌株Bachu38T代表Salinicoccus属的一个新种,命名为Salinicoccus bachuensis sp. nov.,并将菌株Bachu38T (= CGMCC NO.28832 T = JCM 37304 T)确定为模式菌株。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Salinicoccus bachuensis sp. nov., a novel halophilic bacterium, isolated from rhizosphere soil surrounding Tamarix chinensis Lour. plants in Bachu County, Xinjiang, China

Salinicoccus bachuensis sp. nov., a novel halophilic bacterium, isolated from rhizosphere soil surrounding Tamarix chinensis Lour. plants in Bachu County, Xinjiang, China

The strain Bachu38T was isolated from the rhizosphere soil of Tamarix chinensis Lour. plants in Bachu County, Xinjiang, China. This strain exhibited growth under a wide range of conditions, with temperature tolerance from 8 to 45°C (optimal at 28°C), pH adaptability between 7.0 and 10.0 (optimal range 8.0–9.0), and NaCl concentration tolerance spanning 2–20% (w/v), with optimal growth observed at 8% NaCl concentration. The cells displayed a spherical morphology and were Gram-positive, non-motile, and devoid of flagella. Biochemical characterization demonstrated positive reactions for both oxidase and catalase activities. Phylogenetic analysis of the 16S rRNA gene sequences revealed that strain Bachu38T forms an independent branch within the genus Salinicoccus, sharing the highest sequence similarity with S. roseus DSM 5351 T (98.43%) and S. amylolyticus JC304T (98.29%). The whole genome comprised 2.62 Mb, with a G + C content of 49.5%. When compared with the related strains, the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values were 71.34–90.99% and 17.20–42.40%, respectively, which were below the suggested species identification threshold (ANI: < 95–96%, dDDH: < 70%) for different prokaryotic species. The respiratory quinone was identified as MK-6, and the cell wall peptidoglycan type was L-Lys-Gly5. Fatty acid analysis demonstrated that the major cellular fatty acids were iso-C15:0 and anteiso-C15:0, each accounting for more than 10% of the total fatty acid composition. The polar lipid profile consisted of phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), glycolipid (GL), along with two unidentified lipids (designated as UL1 and UL2). Based on polyphasic taxonomic approaches incorporating phenotypic, physiological, and biochemical characteristics, along with comprehensive phylogenetic and genomic analyses, strain Bachu38T is proposed to represent a novel species of the genus Salinicoccus, named Salinicoccus bachuensis sp. nov., with strain Bachu38T (= CGMCC NO.28832 T = JCM 37304 T) designated as the type strain.

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来源期刊
Archives of Microbiology
Archives of Microbiology 生物-微生物学
CiteScore
4.90
自引率
3.60%
发文量
601
审稿时长
3 months
期刊介绍: Research papers must make a significant and original contribution to microbiology and be of interest to a broad readership. The results of any experimental approach that meets these objectives are welcome, particularly biochemical, molecular genetic, physiological, and/or physical investigations into microbial cells and their interactions with their environments, including their eukaryotic hosts. Mini-reviews in areas of special topical interest and papers on medical microbiology, ecology and systematics, including description of novel taxa, are also published. Theoretical papers and those that report on the analysis or ''mining'' of data are acceptable in principle if new information, interpretations, or hypotheses emerge.
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