通过生物信息学和单细胞分析探讨骨关节炎PANoptosis的机制和穿心莲内酯的治疗潜力。

IF 5.7 2区 生物学 Q1 BIOLOGY
Daqian Zhou, Yingjin Luo, Fengjiang Li, Tao Liu, Yongliang Mei, Feilong Li, Xianghan Hou, Zhijiang Fu, Zongchao Liu
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引用次数: 0

摘要

背景:骨关节炎(OA)是一种以软骨破坏为特征的退行性关节疾病,其中细胞凋亡起关键作用。虽然已经研究了OA中凋亡相关基因,但对panoptoosis相关基因的详细分析和治疗药物的研究仍然有限。方法:我们采用生物信息学分析结合单细胞RNA测序检测OA软骨panoptosis相关基因的表达。确定了参与OA进展的关键PANoptosis基因和关键细胞群。药物预测导致选择穿心莲内酯(Andrographolide, AG),通过分子对接、Western blotting和qRT-PCR在软骨细胞模型中验证其作用。结果:几个panoptoosis相关基因,包括CASP8、TLR3、CASP1、IL18在OA中有显著差异表达。这些基因与细胞凋亡、焦亡和炎性体复合体等过程有关。通路分析显示坏死下垂、toll样受体和凋亡信号通路在OA病理中起重要作用。单细胞分析确定了HomC、EC和preHTC为关键细胞群。AG被预测可以调节PANoptosis基因,实验证实了这一点,表明AG有可能调节参与软骨退变的关键基因。结论:本研究突出了OA中panoptoosis的相关基因,确定穿心莲内酯是一种有前景的治疗药物,为OA的治疗策略提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring the mechanisms of PANoptosis in osteoarthritis and the therapeutic potential of andrographolide through bioinformatics and single-cell analysis.

Background: Osteoarthritis (OA) is a degenerative joint disease marked by the breakdown of cartilage, where apoptosis plays a key role. Although apoptosis-related genes in OA have been studied, a detailed analysis of PANoptosis-related genes and the search for therapeutic drugs remains limited.

Methods: We performed a bioinformatics analysis combined with single-cell RNA sequencing to examine PANoptosis-related gene expression in OA cartilage. Key PANoptosis genes and critical cell populations involved in OA progression were identified. Drug prediction led to the selection of Andrographolide (AG), whose effects were validated through molecular docking, Western blotting, and qRT-PCR in chondrocyte models.

Results: Several PANoptosis-related genes, including CASP8, TLR3, CASP1, and IL18, were significantly differentially expressed in OA. These genes are linked to processes such as apoptosis, pyroptosis, and the inflammasome complex. Pathway analysis revealed necroptosis, Toll-like receptor, and apoptosis signaling pathways as important in OA pathology. Single-cell analysis identified HomC, EC, and preHTC as key cell populations. AG was predicted to regulate PANoptosis genes, which was confirmed experimentally, demonstrating AG's potential to modulate key genes involved in cartilage degeneration.

Conclusion: This study highlights PANoptosis-related genes in OA and identifies Andrographolide as a promising therapeutic drug, offering new insights into OA treatment strategies.

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来源期刊
Biology Direct
Biology Direct 生物-生物学
CiteScore
6.40
自引率
10.90%
发文量
32
审稿时长
7 months
期刊介绍: Biology Direct serves the life science research community as an open access, peer-reviewed online journal, providing authors and readers with an alternative to the traditional model of peer review. Biology Direct considers original research articles, hypotheses, comments, discovery notes and reviews in subject areas currently identified as those most conducive to the open review approach, primarily those with a significant non-experimental component.
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