短杆菌koreense sp. nov.,一种中等嗜盐性细菌,分离自韩国发酵海产品——jogae-jeotgal。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Sohee Nam, Yujin Kim, Min Ji Lee, Yeon Bee Kim, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Se Hee Lee, Seok-Jun Kim, Tae Woong Whon
{"title":"短杆菌koreense sp. nov.,一种中等嗜盐性细菌,分离自韩国发酵海产品——jogae-jeotgal。","authors":"Sohee Nam, Yujin Kim, Min Ji Lee, Yeon Bee Kim, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Se Hee Lee, Seok-Jun Kim, Tae Woong Whon","doi":"10.1099/ijsem.0.006722","DOIUrl":null,"url":null,"abstract":"<p><p>A novel Gram-stain-positive, non-spore-forming, non-motile and rod-shaped bacterium, designated strain CBA3109<sup>T</sup>, was isolated from jogae-jeotgal (fermented clam), a traditional Korean fermented seafood. Strain CBA3109<sup>T</sup> showed growth at 10-30 °C (optimum, 25 °C) and pH 6.0-9.0 (optimum, pH 7.0) and in the presence of 0-15% (w/v) NaCl (optimum, 5%). Phylogenetic analysis of the 16S rRNA gene sequence indicated that strain CBA3109<sup>T</sup> belonged to the genus <i>Brevibacterium</i>, with the highest similarities to <i>Brevibacterium aurantiacum</i> NCDO 739<sup>T</sup> (98.26%) and <i>B. antiquum</i> VKM Ac-2118<sup>T</sup> (98.14%). Strain CBA3109<sup>T</sup> contained MK-8(H<sub>2</sub>) as the major menaquinone. The cell wall peptidoglycan contained <i>meso</i>-diaminopimelic acid. The major fatty acids (>10%) were anteiso-C<sub>15 :  0</sub> and anteiso-C<sub>17 :  0</sub>. The main polar lipids were diphosphatidylglycerol and phosphatidylglycerol. The average nucleotide identity and digital DNA-DNA hybridization values between strain CBA3109<sup>T</sup> and the closest species were 86.2-87.0% and 31.1-33.0 %, respectively. The DNA G+C content of strain CBA3109<sup>T</sup> was 62.7%. Based on the morphological, phylogenetic, chemotaxonomic and genotypic data, strain CBA3109<sup>T</sup> represents a novel species of the genus <i>Brevibacterium</i>, for which the name <i>Brevibacterium koreense</i> sp. nov. is proposed. The type strain is CBA3109<sup>T</sup> (= KACC 23387<sup>T</sup> = DSM 117564<sup>T</sup>).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 3","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Brevibacterium koreense</i> sp. nov., a moderately halophilic bacterium isolated from jogae-jeotgal, a Korean fermented seafood.\",\"authors\":\"Sohee Nam, Yujin Kim, Min Ji Lee, Yeon Bee Kim, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Se Hee Lee, Seok-Jun Kim, Tae Woong Whon\",\"doi\":\"10.1099/ijsem.0.006722\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A novel Gram-stain-positive, non-spore-forming, non-motile and rod-shaped bacterium, designated strain CBA3109<sup>T</sup>, was isolated from jogae-jeotgal (fermented clam), a traditional Korean fermented seafood. Strain CBA3109<sup>T</sup> showed growth at 10-30 °C (optimum, 25 °C) and pH 6.0-9.0 (optimum, pH 7.0) and in the presence of 0-15% (w/v) NaCl (optimum, 5%). Phylogenetic analysis of the 16S rRNA gene sequence indicated that strain CBA3109<sup>T</sup> belonged to the genus <i>Brevibacterium</i>, with the highest similarities to <i>Brevibacterium aurantiacum</i> NCDO 739<sup>T</sup> (98.26%) and <i>B. antiquum</i> VKM Ac-2118<sup>T</sup> (98.14%). Strain CBA3109<sup>T</sup> contained MK-8(H<sub>2</sub>) as the major menaquinone. The cell wall peptidoglycan contained <i>meso</i>-diaminopimelic acid. The major fatty acids (>10%) were anteiso-C<sub>15 :  0</sub> and anteiso-C<sub>17 :  0</sub>. The main polar lipids were diphosphatidylglycerol and phosphatidylglycerol. The average nucleotide identity and digital DNA-DNA hybridization values between strain CBA3109<sup>T</sup> and the closest species were 86.2-87.0% and 31.1-33.0 %, respectively. The DNA G+C content of strain CBA3109<sup>T</sup> was 62.7%. Based on the morphological, phylogenetic, chemotaxonomic and genotypic data, strain CBA3109<sup>T</sup> represents a novel species of the genus <i>Brevibacterium</i>, for which the name <i>Brevibacterium koreense</i> sp. nov. is proposed. The type strain is CBA3109<sup>T</sup> (= KACC 23387<sup>T</sup> = DSM 117564<sup>T</sup>).</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 3\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006722\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006722","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

从韩国传统的发酵海鲜——产蛤中分离到了一株革兰氏染色阳性、不产芽孢、不运动的棒状新菌CBA3109T。菌株CBA3109T在10-30°C(最适25°C)、pH 6.0-9.0(最适pH 7.0)和0-15% (w/v) NaCl(最适5%)条件下生长。16S rRNA基因序列的系统发育分析表明,菌株CBA3109T属于短杆菌属,与金短杆菌NCDO 739T(98.26%)和B. antiquum VKM Ac-2118T(98.14%)相似性最高。菌株CBA3109T以MK-8(H2)为主。细胞壁肽聚糖含有中二氨基亚苯甲酸。主要脂肪酸(bbb10 %)为前iso- c15: 0和前iso- c17: 0。主要极性脂质为二磷脂酰甘油和磷脂酰甘油。菌株CBA3109T与最近种的平均核苷酸同源性和数字DNA-DNA杂交值分别为862 ~ 87.0%和31.1 ~ 33.0%。菌株CBA3109T DNA G+C含量为62.7%。基于形态、系统发育、化学分类和基因型数据,菌株CBA3109T代表了短杆菌属的一个新种,建议将其命名为短杆菌koreense sp. 11。型应变为CBA3109T (= KACC 23387T = DSM 117564T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Brevibacterium koreense sp. nov., a moderately halophilic bacterium isolated from jogae-jeotgal, a Korean fermented seafood.

A novel Gram-stain-positive, non-spore-forming, non-motile and rod-shaped bacterium, designated strain CBA3109T, was isolated from jogae-jeotgal (fermented clam), a traditional Korean fermented seafood. Strain CBA3109T showed growth at 10-30 °C (optimum, 25 °C) and pH 6.0-9.0 (optimum, pH 7.0) and in the presence of 0-15% (w/v) NaCl (optimum, 5%). Phylogenetic analysis of the 16S rRNA gene sequence indicated that strain CBA3109T belonged to the genus Brevibacterium, with the highest similarities to Brevibacterium aurantiacum NCDO 739T (98.26%) and B. antiquum VKM Ac-2118T (98.14%). Strain CBA3109T contained MK-8(H2) as the major menaquinone. The cell wall peptidoglycan contained meso-diaminopimelic acid. The major fatty acids (>10%) were anteiso-C15 :  0 and anteiso-C17 :  0. The main polar lipids were diphosphatidylglycerol and phosphatidylglycerol. The average nucleotide identity and digital DNA-DNA hybridization values between strain CBA3109T and the closest species were 86.2-87.0% and 31.1-33.0 %, respectively. The DNA G+C content of strain CBA3109T was 62.7%. Based on the morphological, phylogenetic, chemotaxonomic and genotypic data, strain CBA3109T represents a novel species of the genus Brevibacterium, for which the name Brevibacterium koreense sp. nov. is proposed. The type strain is CBA3109T (= KACC 23387T = DSM 117564T).

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信