WormRACER:计算机增强记录的稳健分析

IF 5.3 2区 医学 Q1 GERIATRICS & GERONTOLOGY
Bennett T. Van Camp, Quinn N. Zapata, Sean P. Curran
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引用次数: 0

摘要

科学的高通量筛选年龄相关表型的步伐需要开发简化和有效的方法来测量和量化生理结果,并在一个规模上能够提供足够的统计能力来测量群体的变化。在这里,我们介绍了蠕虫鲁棒分析计算机增强记录(WormRACER),一个计算效率高的计算机视觉软件,能够同时从许多动物身上提取六种不同的爬行和游泳指标,包括蠕虫面积,蠕虫长度,爬行速度,游泳速度,动态幅度和波浪起始率(抖动)。此外,我们还开发了一个基于web的门户网站,提供度量平均值和度量与时间图,以便进行简单的数据分析和质量保证。WormRACER将促进运动的快速和定量表征,作为健康寿命的简便测量,使遗传、环境和药物干预的高通量筛选成为可能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
WormRACER: Robust Analysis by Computer-Enhanced Recording

The pace of scientific high-throughput screening for age-related phenotypes requires the need for developing streamlined and efficacious methods of measuring and quantifying physiological outcomes and at a scale that enables adequate statistical power to measure the variation in populations. Here, we introduce Worm Robust Analysis by Computer-Enhanced Recording (WormRACER), a computationally efficient computer vision software capable of extracting six different crawling and swimming metrics from many animals simultaneously, including worm area, worm length, crawling speed, swimming speed, dynamic amplitude, and wave initiation rate (thrashing). Additionally, we developed a web-based portal that provides metric averages and metric vs time graphs that allow for simple data analysis and quality assurance. WormRACER will facilitate the rapid and quantitative characterization of movement as a facile measurement of healthspan enabling power for high-throughput screening of genetic, environmental, and pharmacological interventions.

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来源期刊
GeroScience
GeroScience Medicine-Complementary and Alternative Medicine
CiteScore
10.50
自引率
5.40%
发文量
182
期刊介绍: GeroScience is a bi-monthly, international, peer-reviewed journal that publishes articles related to research in the biology of aging and research on biomedical applications that impact aging. The scope of articles to be considered include evolutionary biology, biophysics, genetics, genomics, proteomics, molecular biology, cell biology, biochemistry, endocrinology, immunology, physiology, pharmacology, neuroscience, and psychology.
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