抑制调节因子x7减轻儿童哮喘气道重塑和炎症。

IF 3.1 4区 医学 Q2 PATHOLOGY
Cytojournal Pub Date : 2025-02-12 eCollection Date: 2025-01-01 DOI:10.25259/Cytojournal_138_2024
Yahui Wu, Tiansheng Dai, Jingwen Qin, Jian Guo, Jitao Fan, Jun Mei, Xiaoli Li, Fang Liu
{"title":"抑制调节因子x7减轻儿童哮喘气道重塑和炎症。","authors":"Yahui Wu, Tiansheng Dai, Jingwen Qin, Jian Guo, Jitao Fan, Jun Mei, Xiaoli Li, Fang Liu","doi":"10.25259/Cytojournal_138_2024","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>Childhood asthma is a chronic heterogeneous syndrome composed of distinct disease entities or phenotypes. This study was conducted to characterize regulatory factor X 7 (RFX7) in childhood asthma.</p><p><strong>Material and methods: </strong>Two available transcriptome datasets (GSE65204 and GSE27011) were used to analyze regulatory factor X (RFX) family members in childhood asthma. Random forest, logistic regression, and linear support vector machine (SVM) analyses were performed to construct an RFX-based classification model. Airway smooth muscle cells (ASMCs) were induced through platelet-derived growth factor-BB (PDGF-BB) for an asthma <i>in vitro</i> model. RFX7 expression was measured through immunoblotting. RFX7 was knocked out by transfection of RFX7 small-interfering RNAs, and then airway remodeling and inflammation were assayed.</p><p><strong>Results: </strong>Among RFX family members, RFX3, RFX7, and RFX-associated protein displayed differential expression in childhood asthma versus healthy controls. Thus, SVM, logistic regression, and random forest-based machine learning models were built. The random forest model presented the best diagnostic efficacy (area under the curve [AUC] = 1 and 0.67 in discovery and verification sets). RFX7 was found to be effective in diagnosing childhood asthma (AUC = 0.724 and 0.775 in discovery and verification sets). In addition, RFX7 was overexpressed in PDGF-BB-stimulated ASMCs (<sup>✶</sup> <sup>✶</sup> <i>P</i> < 0.01). Silencing RFX7 remarkably attenuated the proliferative and migrative capacities of ASMCs with PDGF-BB stimulation (<sup>✶</sup> <sup>✶</sup> <i>P</i> < 0.01). In addition, RFX7 was positively related to neutrophil infiltration in childhood asthma, and its knockdown downregulated the levels of pro-inflammatory cytokines in PDGF-BB-stimulated ASMCs (<sup>✶</sup> <sup>✶</sup> <i>P</i> < 0.01).</p><p><strong>Conclusion: </strong>The findings of this study indicate that RFX7 is a novel molecule that is correlated with airway remodeling and inflammation in childhood asthma, providing insights into the mechanism underlying this disease and its potential clinical importance.</p>","PeriodicalId":49082,"journal":{"name":"Cytojournal","volume":"22 ","pages":"15"},"PeriodicalIF":3.1000,"publicationDate":"2025-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11932952/pdf/","citationCount":"0","resultStr":"{\"title\":\"Suppression of regulatory factor X 7 alleviates airway remodeling and inflammation in childhood asthma.\",\"authors\":\"Yahui Wu, Tiansheng Dai, Jingwen Qin, Jian Guo, Jitao Fan, Jun Mei, Xiaoli Li, Fang Liu\",\"doi\":\"10.25259/Cytojournal_138_2024\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objective: </strong>Childhood asthma is a chronic heterogeneous syndrome composed of distinct disease entities or phenotypes. This study was conducted to characterize regulatory factor X 7 (RFX7) in childhood asthma.</p><p><strong>Material and methods: </strong>Two available transcriptome datasets (GSE65204 and GSE27011) were used to analyze regulatory factor X (RFX) family members in childhood asthma. Random forest, logistic regression, and linear support vector machine (SVM) analyses were performed to construct an RFX-based classification model. Airway smooth muscle cells (ASMCs) were induced through platelet-derived growth factor-BB (PDGF-BB) for an asthma <i>in vitro</i> model. RFX7 expression was measured through immunoblotting. RFX7 was knocked out by transfection of RFX7 small-interfering RNAs, and then airway remodeling and inflammation were assayed.</p><p><strong>Results: </strong>Among RFX family members, RFX3, RFX7, and RFX-associated protein displayed differential expression in childhood asthma versus healthy controls. Thus, SVM, logistic regression, and random forest-based machine learning models were built. The random forest model presented the best diagnostic efficacy (area under the curve [AUC] = 1 and 0.67 in discovery and verification sets). RFX7 was found to be effective in diagnosing childhood asthma (AUC = 0.724 and 0.775 in discovery and verification sets). In addition, RFX7 was overexpressed in PDGF-BB-stimulated ASMCs (<sup>✶</sup> <sup>✶</sup> <i>P</i> < 0.01). Silencing RFX7 remarkably attenuated the proliferative and migrative capacities of ASMCs with PDGF-BB stimulation (<sup>✶</sup> <sup>✶</sup> <i>P</i> < 0.01). In addition, RFX7 was positively related to neutrophil infiltration in childhood asthma, and its knockdown downregulated the levels of pro-inflammatory cytokines in PDGF-BB-stimulated ASMCs (<sup>✶</sup> <sup>✶</sup> <i>P</i> < 0.01).</p><p><strong>Conclusion: </strong>The findings of this study indicate that RFX7 is a novel molecule that is correlated with airway remodeling and inflammation in childhood asthma, providing insights into the mechanism underlying this disease and its potential clinical importance.</p>\",\"PeriodicalId\":49082,\"journal\":{\"name\":\"Cytojournal\",\"volume\":\"22 \",\"pages\":\"15\"},\"PeriodicalIF\":3.1000,\"publicationDate\":\"2025-02-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11932952/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Cytojournal\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.25259/Cytojournal_138_2024\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"PATHOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Cytojournal","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.25259/Cytojournal_138_2024","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"PATHOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

目的:儿童哮喘是一种由不同疾病实体或表型组成的慢性异质性综合征。本研究旨在探讨调节因子x7 (RFX7)在儿童哮喘中的作用。材料和方法:使用两个可用的转录组数据集(GSE65204和GSE27011)分析儿童哮喘中的调节因子X (RFX)家族成员。随机森林、逻辑回归和线性支持向量机(SVM)分析构建了基于rfx的分类模型。通过血小板衍生生长因子- bb (PDGF-BB)诱导哮喘体外模型气道平滑肌细胞(ASMCs)的形成。免疫印迹法检测RFX7的表达。转染RFX7小干扰rna敲除RFX7,观察气道重塑和炎症反应。结果:在RFX家族成员中,RFX3、RFX7和RFX相关蛋白在儿童哮喘与健康对照中表现出差异表达。因此,建立了支持向量机、逻辑回归和基于随机森林的机器学习模型。随机森林模型的诊断效果最好(发现集和验证集的曲线下面积[AUC] = 1和0.67)。RFX7对儿童哮喘的诊断有效(发现集和验证集的AUC分别为0.724和0.775)。此外,RFX7在pdgf - bb刺激的ASMCs中过表达(P < 0.01)。抑制RFX7可显著降低PDGF-BB刺激ASMCs的增殖和迁移能力(P < 0.01)。此外,RFX7与儿童哮喘中性粒细胞浸润呈正相关,其敲低可下调pdgf - bb刺激ASMCs中促炎细胞因子水平(P < 0.01)。结论:本研究结果提示RFX7是一种与儿童哮喘气道重塑和炎症相关的新分子,为该疾病的发病机制及其潜在的临床意义提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Suppression of regulatory factor X 7 alleviates airway remodeling and inflammation in childhood asthma.

Suppression of regulatory factor X 7 alleviates airway remodeling and inflammation in childhood asthma.

Suppression of regulatory factor X 7 alleviates airway remodeling and inflammation in childhood asthma.

Suppression of regulatory factor X 7 alleviates airway remodeling and inflammation in childhood asthma.

Objective: Childhood asthma is a chronic heterogeneous syndrome composed of distinct disease entities or phenotypes. This study was conducted to characterize regulatory factor X 7 (RFX7) in childhood asthma.

Material and methods: Two available transcriptome datasets (GSE65204 and GSE27011) were used to analyze regulatory factor X (RFX) family members in childhood asthma. Random forest, logistic regression, and linear support vector machine (SVM) analyses were performed to construct an RFX-based classification model. Airway smooth muscle cells (ASMCs) were induced through platelet-derived growth factor-BB (PDGF-BB) for an asthma in vitro model. RFX7 expression was measured through immunoblotting. RFX7 was knocked out by transfection of RFX7 small-interfering RNAs, and then airway remodeling and inflammation were assayed.

Results: Among RFX family members, RFX3, RFX7, and RFX-associated protein displayed differential expression in childhood asthma versus healthy controls. Thus, SVM, logistic regression, and random forest-based machine learning models were built. The random forest model presented the best diagnostic efficacy (area under the curve [AUC] = 1 and 0.67 in discovery and verification sets). RFX7 was found to be effective in diagnosing childhood asthma (AUC = 0.724 and 0.775 in discovery and verification sets). In addition, RFX7 was overexpressed in PDGF-BB-stimulated ASMCs ( P < 0.01). Silencing RFX7 remarkably attenuated the proliferative and migrative capacities of ASMCs with PDGF-BB stimulation ( P < 0.01). In addition, RFX7 was positively related to neutrophil infiltration in childhood asthma, and its knockdown downregulated the levels of pro-inflammatory cytokines in PDGF-BB-stimulated ASMCs ( P < 0.01).

Conclusion: The findings of this study indicate that RFX7 is a novel molecule that is correlated with airway remodeling and inflammation in childhood asthma, providing insights into the mechanism underlying this disease and its potential clinical importance.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Cytojournal
Cytojournal PATHOLOGY-
CiteScore
2.20
自引率
42.10%
发文量
56
审稿时长
>12 weeks
期刊介绍: The CytoJournal is an open-access peer-reviewed journal committed to publishing high-quality articles in the field of Diagnostic Cytopathology including Molecular aspects. The journal is owned by the Cytopathology Foundation and published by the Scientific Scholar.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信