基于HPLC-MS/MS的机器学习算法对76种肉碱指标的靶向检测在类风湿关节炎诊断中的应用

IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Metabolites Pub Date : 2025-03-18 DOI:10.3390/metabo15030205
Rui Zhang, Juan Wang, Xiaonan Zhai, Yuanbing Guo, Lei Zhou, Xiaoyan Hao, Liu Yang, Ruiqing Xing, Juanjuan Hu, Jiawei Gao, Fengjuan Wang, Jun Yang, Jiayun Liu
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引用次数: 0

摘要

背景/目的:类风湿关节炎(RA)的早期诊断和治疗对减少残疾至关重要。然而,诊断标准仍不明确,主要依靠临床症状和血液标志物。方法:采用高效液相色谱-质谱(HPLC-MS/MS)靶向检测,对RA患者血清中76项肉毒碱指标(55种肉毒碱和21种相应比例)进行评价,探讨肉毒碱在RA中的作用。研究共纳入359例患者(207例RA患者和152例健康对照)。筛选包括三种方法,综合76项肉碱指标和128项临床指标,确定候选标志物,为RA的诊断和新的治疗靶点建立理论基础。使用三种机器学习算法验证了从筛选的标记中获得的诊断模型。结果:采用8个候选指标(C0, C10:1,淋巴,血小板分布宽度,抗角蛋白抗体,葡萄糖,尿胆素原,红细胞沉降率(ESR))对模型进行了改进。训练集得到的V8模型的受试者工作特征曲线、灵敏度、特异性和准确度分别为>0.948、79.46%、92.99%和89.18%,而测试集得到的受试者工作特征曲线、灵敏度、特异性和准确度分别为>0.925、78.89%、89.22%和85.87%。24种肉毒碱被确定为RA的危险因素,其中3种与ESR显著相关,4种与抗环瓜氨酸肽抗体活性相关,2种与c反应蛋白相关,5种与免疫球蛋白g相关,8种与免疫球蛋白a水平相关,11种与免疫球蛋白m水平相关。结论:肉碱在RA的进展中是不可或缺的。开发的诊断模型显示出出色的诊断能力,提高了早期发现和及时干预,以尽量减少与RA相关的残疾。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Targeted Detection of 76 Carnitine Indicators Combined with a Machine Learning Algorithm Based on HPLC-MS/MS in the Diagnosis of Rheumatoid Arthritis.

Background/objectives: Early diagnosis and treatment of rheumatoid arthritis (RA) are essential to reducing disability. However, the diagnostic criteria remain unclear, relying on clinical symptoms and blood markers.

Methods: Using high-performance liquid chromatography-mass spectrometry (HPLC-MS/MS) targeted detection, we evaluated 76 carnitine indicators (55 carnitines and 21 corresponding ratios) in the serum of patients with RA to investigate the role of carnitine in RA. A total of 359 patients (207 patients with RA and 152 healthy controls) were included in the study. Screening involved three methods and integrated 76 carnitine indicators and 128 clinical indicators to identify candidate markers to establish a theoretical basis for RA diagnosis and new therapeutic targets. The diagnostic model derived from the screened markers was validated using three machine learning algorithms.

Results: The model was refined using eight candidate indicators (C0, C10:1, LYMPH, platelet distribution width, anti-keratin antibody, glucose, urobilinogen, and erythrocyte sedimentation rate (ESR)). The receiver operating characteristic curve, sensitivity, specificity, and accuracy of the V8 model obtained from the training set were >0.948, 79.46%, 92.99%, and 89.18%, whereas those of the test set were >0.925, 78.89%, 89.22%, and 85.87%, respectively. Twenty-four carnitines were identified as risk factors of RA, with three significantly correlating with ESR, four with anti-cyclic citrullinated peptide antibody activity, two with C-reactive protein, five with immunoglobulin-G, eight with immunoglobulin-A levels, and eleven with immunoglobulin-M levels.

Conclusions: Carnitine is integral in the progression of RA. The diagnostic model developed shows excellent diagnostic capacity, improving early detection and enabling timely intervention to minimize disability associated with RA.

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来源期刊
Metabolites
Metabolites Biochemistry, Genetics and Molecular Biology-Molecular Biology
CiteScore
5.70
自引率
7.30%
发文量
1070
审稿时长
17.17 days
期刊介绍: Metabolites (ISSN 2218-1989) is an international, peer-reviewed open access journal of metabolism and metabolomics. Metabolites publishes original research articles and review articles in all molecular aspects of metabolism relevant to the fields of metabolomics, metabolic biochemistry, computational and systems biology, biotechnology and medicine, with a particular focus on the biological roles of metabolites and small molecule biomarkers. Metabolites encourages scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on article length. Sufficient experimental details must be provided to enable the results to be accurately reproduced. Electronic material representing additional figures, materials and methods explanation, or supporting results and evidence can be submitted with the main manuscript as supplementary material.
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