揭示与硒增强糖尿病小鼠胰腺功能相关的枢纽基因。

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xiaofeng Li, Zhihao Chen, Tao Wang, Zhongyuan Wang, Bing Yang
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引用次数: 0

摘要

为了阐明硒对糖尿病患者胰腺功能保护作用的分子机制,我们对来自基因表达综合(GEO)的GSE55636数据集进行了全面的生物信息学分析。该数据集包括来自链脲佐菌素诱导的糖尿病小鼠的胰腺组织样本,包括三只给予0.8 mg/kg体重的硒酸钠(Na2SeO3, SS)的小鼠和三只匹配的对照组。我们的研究发现,在ss处理的胰腺组织中有838个差异表达基因(DEGs),其中500个基因上调,338个基因下调。通过蛋白-蛋白相互作用(PPI)网络分析,我们确定了20个枢纽基因(包括FOS、PTGS2、CXCL1、IL5、CCL7、IRF1、PTPRC、EGR2和CD80)表现出最高的连通性得分。基因本体(GO)富集分析表明,这些中心基因主要与关键的生物过程相关:染色体分离、有丝分裂细胞周期调节、炎症反应调节、免疫系统激活。KEGG通路分析进一步发现它们在关键信号通路TNF-α、NF-κB、MAPK、il -17介导的炎症、趋化因子介导的免疫调节中显著富集。值得注意的是,已确定的途径显示与胰腺β细胞存活、胰岛素分泌调节和氧化应激缓解密切相关。这些发现系统地表征了糖尿病胰腺组织中硒响应分子网络,为硒保护胰腺的营养基因组机制提供了新的见解。发现的20个中心基因可能作为通过补充硒来管理糖尿病的潜在治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Unveiling the Hub Genes Associated with the Enhanced Effects of Selenium on Pancreas Function in Diabetic Mice.

To elucidate the molecular mechanisms underlying the protective effects of selenium on pancreatic function in diabetes mellitus, we performed a comprehensive bioinformatics analysis of the GSE55636 dataset from the Gene Expression Omnibus (GEO). This dataset comprised pancreatic tissue samples from streptozotocin-induced diabetic mice, including three mice administered 0.8 mg/kg body weight sodium selenate (Na2SeO3, SS) and three matched controls. Our investigation revealed 838 differentially expressed genes (DEGs) in SS-treated pancreatic tissue, with 500 up-regulated and 338 down-regulated genes. Through protein-protein interaction (PPI) network analysis, we identified 20 hub genes (including FOS, PTGS2, CXCL1, IL5, CCL7, IRF1, PTPRC, EGR2, and CD80) exhibiting the highest connectivity scores. Gene Ontology (GO) enrichment analysis demonstrated these hub genes were predominantly associated with critical biological processes: Chromosomal segregation, Mitotic cell cycle regulation, Inflammatory response modulation, Immune system activation. KEGG pathway analysis further revealed their significant enrichment in key signaling pathways: TNF-α, NF-κB, MAPK, IL-17-mediated inflammation, Chemokine-mediated immune regulation. Notably, the identified pathways demonstrated strong associations with pancreatic β-cell survival, insulin secretion regulation, and oxidative stress mitigation. These findings systematically characterize the selenium-responsive molecular network in diabetic pancreatic tissue, providing novel insights into the nutrigenomic mechanisms of selenium's pancreatic protection. The 20 hub genes identified may serve as potential therapeutic targets for diabetes management through selenium supplementation.

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来源期刊
Molecular Biotechnology
Molecular Biotechnology 医学-生化与分子生物学
CiteScore
4.10
自引率
3.80%
发文量
165
审稿时长
6 months
期刊介绍: Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.
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