阐明 LINC01980 在喉癌中的作用:从表达谱分析到调控网络预测。

IF 1.5 Q3 MEDICINE, RESEARCH & EXPERIMENTAL
Masoumeh Razipour, Zeinab Jamali, Elham Ghadami, Saeed Sohrabpour, Leyla Sahebi, Abbas Shakoori
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引用次数: 0

摘要

尽管在治疗方面取得了进展,喉鳞状细胞癌(LSCC)仍然是一个重大的全球健康挑战。本研究探讨了长链非编码RNA LINC01980在LSCC发病机制中的作用。我们对来自Cancer Genome Atlas (TCGA)和Gene Expression Omnibus (GEO)数据库的转录组学数据进行了综合分析,以确定LSCC中差异表达的基因。采用实时荧光定量PCR (qRT-PCR)技术对32对匹配的晚期LSCC和邻近正常组织中LINC01980的表达进行评估。通过生物信息学分析,探索了与LINC01980相关的潜在竞争内源RNA (ceRNA)网络。结果显示,与正常邻近组织相比,LSCC组织中LINC01980的表达显著上调(p < 0.0001), 78.125%的肿瘤样本中表达升高。受试者工作特征(ROC)曲线分析显示LINC01980作为诊断性生物标志物的潜力(AUC = 0.7666, p = 0.0002)。虽然没有发现LINC01980表达与临床病理特征之间的显著相关性,但生物信息学分析发现了潜在的LINC01980/ miRNA/ mRNA调控网络,涉及hsa-let-7e-5p和枢纽基因MMP9。本研究揭示了LINC01980在LSCC中的作用,并提示其作为诊断生物标志物和治疗靶点的潜力。LINC01980在LSCC进展中的确切分子机制有待进一步研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Elucidating the Role of LINC01980 in Laryngeal Cancer: From Expression Profiling to Regulatory Network Prediction.

Laryngeal squamous cell carcinoma (LSCC) remains a significant global health challenge despite advances in treatment. This study investigated the involvement of LINC01980, a long non-coding RNA, in LSCC pathogenesis. We conducted an integrative analysis of transcriptomic data sourced from The Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO) databases to identify genes that are differentially expressed in LSCC. LINC01980 expression was evaluated in 32 matched pairs of advanced-stage LSCC and adjacent normal tissues using quantitative real-time PCR (qRT-PCR). The potential competing endogenous RNA (ceRNA) network involving LINC01980 was explored through bioinformatics analyses. Findings revealed significant upregulation of LINC01980 in LSCC tissues compared to normal adjacent tissues (p < 0.0001), with elevated expression in 78.125% of tumor samples. Receiver Operating Characteristic (ROC) curve analysis demonstrated LINC01980's potential as a diagnostic biomarker (AUC = 0.7666, p = 0.0002). While no significant correlations were found between LINC01980 expression and clinicopathological features, bioinformatics analyses identified potential LINC01980/ miRNA/ mRNA regulatory network involving hsa-let-7e-5p and hub gene MMP9. This study provides insights into LINC01980's role in LSCC and suggests its potential as a diagnostic biomarker and therapeutic target. Further research is warranted to elucidate the precise molecular mechanisms of LINC01980 in LSCC progression.

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来源期刊
CiteScore
3.60
自引率
0.00%
发文量
0
期刊介绍: The International Journal of Molecular and Cellular Medicine (IJMCM) is a peer-reviewed, quarterly publication of Cellular and Molecular Biology Research Center (CMBRC), Babol University of Medical Sciences, Babol, Iran. The journal covers all cellular & molecular biology and medicine disciplines such as the genetic basis of disease, biomarker discovery in diagnosis and treatment, genomics and proteomics, bioinformatics, computer applications in human biology, stem cells and tissue engineering, medical biotechnology, nanomedicine, cellular processes related to growth, death and survival, clinical biochemistry, molecular & cellular immunology, molecular and cellular aspects of infectious disease and cancer research. IJMCM is a free access journal. All open access articles published in IJMCM are distributed under the terms of the Creative Commons Attribution CC BY. The journal doesn''t have any submission and article processing charges (APCs).
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