Cláudia Teixeira, Sara Rodrigues, João Amorim, Bárbara S Diogo, Ivo Pinto, António Paulo Carvalho, Sara C Antunes, Luís Oliva Teles
{"title":"斑马鱼对咖啡因暴露的行为和生化标志物的综合机器学习评估。","authors":"Cláudia Teixeira, Sara Rodrigues, João Amorim, Bárbara S Diogo, Ivo Pinto, António Paulo Carvalho, Sara C Antunes, Luís Oliva Teles","doi":"10.1007/s10646-025-02873-0","DOIUrl":null,"url":null,"abstract":"<p><p>Environmental exposure to caffeine (CAF) poses potential risks to aquatic ecosystems, affecting non-target species. This study investigated the chronic effects of environmentally relevant CAF concentrations, ranging from 0.16-50 µg/L, on zebrafish behaviour. A Kohonen-type artificial neural network classified zebrafish behaviour into nine behavioural classes based on a set of movement descriptors (mean meander, mean velocity, instantaneous velocity, distance to centre point, mean angular velocity and instantaneous acceleration), while a comprehensive analysis integrated behavioural classes previously defined and biochemical markers of oxidative stress, lipid peroxidation, reserve energy content, energetic pathways, and neurotoxicity. The discriminant analysis demonstrated that behaviour descriptors and biomarkers individually explained 38% and 67% of data variation, respectively, while the combination resulted in 19 models with 100% correct diagnosis. One of the models (Model A) seemed to suit the best dose-response relationship, incorporating key biomarkers including superoxide dismutase, catalase, glutathione peroxidase activities, and behavioural characteristics such as movement distance and velocity. This suggested methodology offers a different approach to evaluating CAF's ecological impact, highlighting behavioural analysis as a valuable complement to traditional ecotoxicological assessments. This study provides a novel framework for understanding organism-level responses to environmental stressors (e.g., several anthropogenic compounds), utilising Mahalanobis distance as an integrative response index. This approach shows promise for broader application in assessing the impact of various aquatic contaminants on aquatic organisms (from bacteria to fish), potentially extending to pharmaceuticals, pesticides, and industrial pollutants.</p>","PeriodicalId":11497,"journal":{"name":"Ecotoxicology","volume":" ","pages":"746-759"},"PeriodicalIF":2.7000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12254161/pdf/","citationCount":"0","resultStr":"{\"title\":\"Comprehensive machine learning assessment of zebrafish behaviour and biochemical markers in response to caffeine exposure.\",\"authors\":\"Cláudia Teixeira, Sara Rodrigues, João Amorim, Bárbara S Diogo, Ivo Pinto, António Paulo Carvalho, Sara C Antunes, Luís Oliva Teles\",\"doi\":\"10.1007/s10646-025-02873-0\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Environmental exposure to caffeine (CAF) poses potential risks to aquatic ecosystems, affecting non-target species. This study investigated the chronic effects of environmentally relevant CAF concentrations, ranging from 0.16-50 µg/L, on zebrafish behaviour. A Kohonen-type artificial neural network classified zebrafish behaviour into nine behavioural classes based on a set of movement descriptors (mean meander, mean velocity, instantaneous velocity, distance to centre point, mean angular velocity and instantaneous acceleration), while a comprehensive analysis integrated behavioural classes previously defined and biochemical markers of oxidative stress, lipid peroxidation, reserve energy content, energetic pathways, and neurotoxicity. The discriminant analysis demonstrated that behaviour descriptors and biomarkers individually explained 38% and 67% of data variation, respectively, while the combination resulted in 19 models with 100% correct diagnosis. One of the models (Model A) seemed to suit the best dose-response relationship, incorporating key biomarkers including superoxide dismutase, catalase, glutathione peroxidase activities, and behavioural characteristics such as movement distance and velocity. This suggested methodology offers a different approach to evaluating CAF's ecological impact, highlighting behavioural analysis as a valuable complement to traditional ecotoxicological assessments. This study provides a novel framework for understanding organism-level responses to environmental stressors (e.g., several anthropogenic compounds), utilising Mahalanobis distance as an integrative response index. This approach shows promise for broader application in assessing the impact of various aquatic contaminants on aquatic organisms (from bacteria to fish), potentially extending to pharmaceuticals, pesticides, and industrial pollutants.</p>\",\"PeriodicalId\":11497,\"journal\":{\"name\":\"Ecotoxicology\",\"volume\":\" \",\"pages\":\"746-759\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12254161/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Ecotoxicology\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://doi.org/10.1007/s10646-025-02873-0\",\"RegionNum\":4,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/3/19 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecotoxicology","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.1007/s10646-025-02873-0","RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/3/19 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"ECOLOGY","Score":null,"Total":0}
Comprehensive machine learning assessment of zebrafish behaviour and biochemical markers in response to caffeine exposure.
Environmental exposure to caffeine (CAF) poses potential risks to aquatic ecosystems, affecting non-target species. This study investigated the chronic effects of environmentally relevant CAF concentrations, ranging from 0.16-50 µg/L, on zebrafish behaviour. A Kohonen-type artificial neural network classified zebrafish behaviour into nine behavioural classes based on a set of movement descriptors (mean meander, mean velocity, instantaneous velocity, distance to centre point, mean angular velocity and instantaneous acceleration), while a comprehensive analysis integrated behavioural classes previously defined and biochemical markers of oxidative stress, lipid peroxidation, reserve energy content, energetic pathways, and neurotoxicity. The discriminant analysis demonstrated that behaviour descriptors and biomarkers individually explained 38% and 67% of data variation, respectively, while the combination resulted in 19 models with 100% correct diagnosis. One of the models (Model A) seemed to suit the best dose-response relationship, incorporating key biomarkers including superoxide dismutase, catalase, glutathione peroxidase activities, and behavioural characteristics such as movement distance and velocity. This suggested methodology offers a different approach to evaluating CAF's ecological impact, highlighting behavioural analysis as a valuable complement to traditional ecotoxicological assessments. This study provides a novel framework for understanding organism-level responses to environmental stressors (e.g., several anthropogenic compounds), utilising Mahalanobis distance as an integrative response index. This approach shows promise for broader application in assessing the impact of various aquatic contaminants on aquatic organisms (from bacteria to fish), potentially extending to pharmaceuticals, pesticides, and industrial pollutants.
期刊介绍:
Ecotoxicology is an international journal devoted to the publication of fundamental research on the effects of toxic chemicals on populations, communities and terrestrial, freshwater and marine ecosystems. It aims to elucidate mechanisms and processes whereby chemicals exert their effects on ecosystems and the impact caused at the population or community level. The journal is not biased with respect to taxon or biome, and papers that indicate possible new approaches to regulation and control of toxic chemicals and those aiding in formulating ways of conserving threatened species are particularly welcome. Studies on individuals should demonstrate linkage to population effects in clear and quantitative ways. Laboratory studies must show a clear linkage to specific field situations. The journal includes not only original research papers but technical notes and review articles, both invited and submitted. A strong, broadly based editorial board ensures as wide an international coverage as possible.