Nageswar Sahu, Biswanath Mahanty and Dibyajyoti Haldar
{"title":"用紫外可见光谱和偏最小二乘回归快速定量发酵液中的普鲁兰。","authors":"Nageswar Sahu, Biswanath Mahanty and Dibyajyoti Haldar","doi":"10.1039/D5AY00034C","DOIUrl":null,"url":null,"abstract":"<p >Quantification of exopolysaccharide (EPS) production in fermentation broth requires solvent precipitation of the polymer, followed by acid or enzymatic hydrolysis, and colorimetric or chromatographic analysis. This lengthy multistep sample preparation and analysis is a major bottleneck in bioprocess monitoring. The development of a nondestructive analytical method requiring minimal sample preparation is warranted. In this study, partial least squares (PLS) regression models were developed to quantify pullulan in cell-free supernatant (PCS) and precipitated pullulan redissolved in distilled water (PDW) from spectral data (204–400 nm). Genetic algorithm, particle swarm optimization, competitive adaptive reweighted sampling, and adaptive bottom-up space exploration strategies were employed to select optimal spectral regions. The full-spectrum model on the PCS (5 latent variables, RMSE<small><sub>CV</sub></small>: 0.020 g l<small><sup>−1</sup></small>, <em>R</em><small><sub>CV</sub></small><small><sup>2</sup></small>: 0.997) outperformed the PDW (3 latent variables, <em>R</em><small><sub>CV</sub></small><small><sup>2</sup></small>: 0.990). Adaptive bottom-up space exploration achieved the lowest RMSE<small><sub>CV</sub></small> (0.009 g l<small><sup>−1</sup></small> for the PCS, 0.027 g l<small><sup>−1</sup></small> for the PDW), retaining just 16 and 21 spectral variables, respectively. The residual predictive deviation (RPD) for all PLS model variants remains satisfactory (>6.559). The method's limit of detection (0.021 g l<small><sup>−1</sup></small>) was suitable for quantifying pullulan in fermentation broth. The proposed method can be extended to other structurally similar biopolymers where PLS-based soft sensor integration would enable real-time monitoring and bioprocess control.</p>","PeriodicalId":64,"journal":{"name":"Analytical Methods","volume":" 14","pages":" 2841-2849"},"PeriodicalIF":2.7000,"publicationDate":"2025-03-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Rapid quantification of pullulan in fermentation broth using UV-visible spectroscopy and partial least squares regression†\",\"authors\":\"Nageswar Sahu, Biswanath Mahanty and Dibyajyoti Haldar\",\"doi\":\"10.1039/D5AY00034C\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Quantification of exopolysaccharide (EPS) production in fermentation broth requires solvent precipitation of the polymer, followed by acid or enzymatic hydrolysis, and colorimetric or chromatographic analysis. This lengthy multistep sample preparation and analysis is a major bottleneck in bioprocess monitoring. The development of a nondestructive analytical method requiring minimal sample preparation is warranted. In this study, partial least squares (PLS) regression models were developed to quantify pullulan in cell-free supernatant (PCS) and precipitated pullulan redissolved in distilled water (PDW) from spectral data (204–400 nm). Genetic algorithm, particle swarm optimization, competitive adaptive reweighted sampling, and adaptive bottom-up space exploration strategies were employed to select optimal spectral regions. The full-spectrum model on the PCS (5 latent variables, RMSE<small><sub>CV</sub></small>: 0.020 g l<small><sup>−1</sup></small>, <em>R</em><small><sub>CV</sub></small><small><sup>2</sup></small>: 0.997) outperformed the PDW (3 latent variables, <em>R</em><small><sub>CV</sub></small><small><sup>2</sup></small>: 0.990). 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引用次数: 0
摘要
发酵液中胞外多糖(EPS)产量的定量需要溶剂沉淀聚合物,然后进行酸或酶水解,并进行比色或色谱分析。这种冗长的多步骤样品制备和分析是生物过程监测的主要瓶颈。需要最少样品制备的无损分析方法的发展是必要的。本研究采用偏最小二乘(PLS)回归模型,从光谱数据(204 ~ 400 nm)对无细胞上清(PCS)和蒸馏水再溶沉淀普鲁兰(PDW)进行定量分析。采用遗传算法、粒子群优化、竞争自适应重加权采样和自适应自下而上空间探索策略选择最优光谱区域。PCS全谱模型(5个潜在变量,RMSECV: 0.020 g -1, RCV2: 0.997)优于PDW(3个潜在变量,RCV2: 0.990)。自适应自下而上的空间探索获得了最低的RMSECV (PCS为0.009 g -1, PDW为0.027 g -1),分别只保留了16和21个光谱变量。所有PLS模型变体的残差预测偏差(RPD)仍然令人满意(>6.559)。方法的检出限为0.021 g -1,适用于发酵液中普鲁兰的定量测定。所提出的方法可以扩展到其他结构类似的生物聚合物,其中基于pls的软传感器集成将实现实时监测和生物过程控制。
Rapid quantification of pullulan in fermentation broth using UV-visible spectroscopy and partial least squares regression†
Quantification of exopolysaccharide (EPS) production in fermentation broth requires solvent precipitation of the polymer, followed by acid or enzymatic hydrolysis, and colorimetric or chromatographic analysis. This lengthy multistep sample preparation and analysis is a major bottleneck in bioprocess monitoring. The development of a nondestructive analytical method requiring minimal sample preparation is warranted. In this study, partial least squares (PLS) regression models were developed to quantify pullulan in cell-free supernatant (PCS) and precipitated pullulan redissolved in distilled water (PDW) from spectral data (204–400 nm). Genetic algorithm, particle swarm optimization, competitive adaptive reweighted sampling, and adaptive bottom-up space exploration strategies were employed to select optimal spectral regions. The full-spectrum model on the PCS (5 latent variables, RMSECV: 0.020 g l−1, RCV2: 0.997) outperformed the PDW (3 latent variables, RCV2: 0.990). Adaptive bottom-up space exploration achieved the lowest RMSECV (0.009 g l−1 for the PCS, 0.027 g l−1 for the PDW), retaining just 16 and 21 spectral variables, respectively. The residual predictive deviation (RPD) for all PLS model variants remains satisfactory (>6.559). The method's limit of detection (0.021 g l−1) was suitable for quantifying pullulan in fermentation broth. The proposed method can be extended to other structurally similar biopolymers where PLS-based soft sensor integration would enable real-time monitoring and bioprocess control.