{"title":"利用高光谱成像和机器学习诊断由黄单胞菌(Xanthomonas oryzae pv. oryzae)、泛氏菌(Pantoea ananatis)和肠杆菌(Enterobacter asburiae)引起的水稻细菌性枯萎病症状。","authors":"Meng Zhang, Shuqi Tang, Chenjie Lin, Zichao Lin, Liping Zhang, Wei Dong, Nan Zhong","doi":"10.3390/plants14050733","DOIUrl":null,"url":null,"abstract":"<p><p>In rice, infections caused by <i>Pantoea ananatis</i> or <i>Enterobacter asburiae</i> closely resemble the bacterial blight induced by <i>Xanthomonas oryzae</i> pv. <i>oryzae</i>, yet they differ in drug resistance and management strategies. This study explores the potential of combining hyperspectral imaging (HSI) with machine learning for the rapid and accurate detection of rice bacterial blight symptoms caused by various pathogens. One-dimensional convolutional neural networks (1DCNNs) were employed to construct a classification model, integrating various spectral preprocessing techniques and feature selection algorithms for comparison. To enhance model robustness and mitigate overfitting due to limited spectral samples, generative adversarial networks (GANs) were utilized to augment the dataset. The results indicated that the 1DCNN model, after feature selection using uninformative variable elimination (UVE), achieved an accuracy of 86.11% and an F1 score of 0.8625 on the five-class dataset. However, the dominance of <i>Pantoea ananatis</i> in mixed bacterial samples negatively impacted classification performance. After removing mixed-infection samples, the model attained an accuracy of 97.06% and an F1 score of 0.9703 on the four-class dataset, demonstrating high classification accuracy across different pathogen-induced infections. Key spectral bands were identified at 420-490 nm, 610-670 nm, 780-850 nm, and 910-940 nm, facilitating pathogen differentiation. This study presents a precise, non-destructive approach to plant disease detection, offering valuable insights into disease prevention and management in precision agriculture.</p>","PeriodicalId":56267,"journal":{"name":"Plants-Basel","volume":"14 5","pages":""},"PeriodicalIF":4.0000,"publicationDate":"2025-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11901819/pdf/","citationCount":"0","resultStr":"{\"title\":\"Hyperspectral Imaging and Machine Learning for Diagnosing Rice Bacterial Blight Symptoms Caused by <i>Xanthomonas oryzae</i> pv. <i>oryzae</i>, <i>Pantoea ananatis</i> and <i>Enterobacter asburiae</i>.\",\"authors\":\"Meng Zhang, Shuqi Tang, Chenjie Lin, Zichao Lin, Liping Zhang, Wei Dong, Nan Zhong\",\"doi\":\"10.3390/plants14050733\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In rice, infections caused by <i>Pantoea ananatis</i> or <i>Enterobacter asburiae</i> closely resemble the bacterial blight induced by <i>Xanthomonas oryzae</i> pv. <i>oryzae</i>, yet they differ in drug resistance and management strategies. This study explores the potential of combining hyperspectral imaging (HSI) with machine learning for the rapid and accurate detection of rice bacterial blight symptoms caused by various pathogens. One-dimensional convolutional neural networks (1DCNNs) were employed to construct a classification model, integrating various spectral preprocessing techniques and feature selection algorithms for comparison. To enhance model robustness and mitigate overfitting due to limited spectral samples, generative adversarial networks (GANs) were utilized to augment the dataset. The results indicated that the 1DCNN model, after feature selection using uninformative variable elimination (UVE), achieved an accuracy of 86.11% and an F1 score of 0.8625 on the five-class dataset. However, the dominance of <i>Pantoea ananatis</i> in mixed bacterial samples negatively impacted classification performance. After removing mixed-infection samples, the model attained an accuracy of 97.06% and an F1 score of 0.9703 on the four-class dataset, demonstrating high classification accuracy across different pathogen-induced infections. Key spectral bands were identified at 420-490 nm, 610-670 nm, 780-850 nm, and 910-940 nm, facilitating pathogen differentiation. This study presents a precise, non-destructive approach to plant disease detection, offering valuable insights into disease prevention and management in precision agriculture.</p>\",\"PeriodicalId\":56267,\"journal\":{\"name\":\"Plants-Basel\",\"volume\":\"14 5\",\"pages\":\"\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2025-02-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11901819/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plants-Basel\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3390/plants14050733\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plants-Basel","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3390/plants14050733","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Hyperspectral Imaging and Machine Learning for Diagnosing Rice Bacterial Blight Symptoms Caused by Xanthomonas oryzae pv. oryzae, Pantoea ananatis and Enterobacter asburiae.
In rice, infections caused by Pantoea ananatis or Enterobacter asburiae closely resemble the bacterial blight induced by Xanthomonas oryzae pv. oryzae, yet they differ in drug resistance and management strategies. This study explores the potential of combining hyperspectral imaging (HSI) with machine learning for the rapid and accurate detection of rice bacterial blight symptoms caused by various pathogens. One-dimensional convolutional neural networks (1DCNNs) were employed to construct a classification model, integrating various spectral preprocessing techniques and feature selection algorithms for comparison. To enhance model robustness and mitigate overfitting due to limited spectral samples, generative adversarial networks (GANs) were utilized to augment the dataset. The results indicated that the 1DCNN model, after feature selection using uninformative variable elimination (UVE), achieved an accuracy of 86.11% and an F1 score of 0.8625 on the five-class dataset. However, the dominance of Pantoea ananatis in mixed bacterial samples negatively impacted classification performance. After removing mixed-infection samples, the model attained an accuracy of 97.06% and an F1 score of 0.9703 on the four-class dataset, demonstrating high classification accuracy across different pathogen-induced infections. Key spectral bands were identified at 420-490 nm, 610-670 nm, 780-850 nm, and 910-940 nm, facilitating pathogen differentiation. This study presents a precise, non-destructive approach to plant disease detection, offering valuable insights into disease prevention and management in precision agriculture.
Plants-BaselAgricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
6.50
自引率
11.10%
发文量
2923
审稿时长
15.4 days
期刊介绍:
Plants (ISSN 2223-7747), is an international and multidisciplinary scientific open access journal that covers all key areas of plant science. It publishes review articles, regular research articles, communications, and short notes in the fields of structural, functional and experimental botany. In addition to fundamental disciplines such as morphology, systematics, physiology and ecology of plants, the journal welcomes all types of articles in the field of applied plant science.