正常和衰老癌细胞中信使RNA中不同的8-氧鸟嘌呤谱概述。

IF 4.6 2区 生物学 Q2 CELL BIOLOGY
Frontiers in Cell and Developmental Biology Pub Date : 2025-02-28 eCollection Date: 2025-01-01 DOI:10.3389/fcell.2025.1443888
Jingwen Huang, Yu Lin, Yingying Zhao, Lingbo Wei
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引用次数: 0

摘要

背景:细胞衰老在癌症的发展中起着关键作用,但其潜在机制尚不清楚。最近几项研究表明,RNA甲基化与癌细胞衰老密切相关。8-氧鸟嘌呤(o8G)是一种重要且广泛分布的甲基化修饰物,其在癌细胞衰老中的作用尚不清楚。方法:通过敲低ADAR1基因构建衰老癌细胞模型(CaCO2细胞)。采用RNA免疫沉淀测序法对正常CaCO2细胞和衰老CaCO2细胞信使RNA (mRNA)上的o8G峰进行鉴定,确定mRNA o8G修饰的分布特征。进一步对测序数据进行生物信息学分析,初步阐明o8g修饰mRNA的潜在功能。结果:正常CaCO2细胞与衰老CaCO2细胞mRNA o8G修饰分布差异有统计学意义。提示o8G修饰可能在诱导癌细胞或促进癌细胞衰老中起关键作用。基因本体(GO)富集分析表明,经o8G修饰的mrna在细胞组分组织或生物发生、局灶黏附和RNA结合等方面富集。京都基因与基因组百科(KEGG)通路分析显示,o8G修饰的基因集中在局灶黏附信号通路、小细胞肺癌信号通路和癌症信号通路中的蛋白聚糖中。结论:本研究初步揭示了o8G修饰在正常caco_2细胞和衰老caco_2细胞中的不同分布规律。我们的研究建立了o8G修饰与癌细胞衰老之间的联系,为癌细胞衰老的机制提供了新的认识,并为后续的癌症治疗提供了潜在的治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Overview of distinct 8-oxoguanine profiles of messenger RNA in normal and senescent cancer cells.

Background: Cellular senescence plays a key role in the development of cancer, but the underlying mechanisms are unknown. Recently, several recent studies have shown that RNA methylation is closely related to cancer cell aging. 8-Oxoguanine (o8G) is an important and widely distributed methylation modification whose role in cancer cell senescence is far from elucidated.

Methods: In this study, senescent cancer cell models (CaCO2 cells) were constructed by knocking down the ADAR1 gene. RNA immunoprecipitation sequencing was used to identify the o8G peaks on messenger RNA (mRNA) of normal CaCO2 cells and senescent CaCO2 cells, and the distribution characteristics of mRNA o8G modification were identified. Further bioinformatics analysis of the sequencing data was performed to preliminarily elucidate the potential function of the o8G-modified mRNA.

Results: There were significant differences in mRNA o8G modification distribution between normal and senescent CaCO2 cells. It is suggested that o8G modification may play a key role in inducing cancer cells or promoting cancer cell senescence. Gene ontology (GO) enrichment analysis showed that the mRNAs modified by o8G were enriched in Cellular component organization or biogenesis, Focal adhesion, and RNA binding. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis showed that the genes modified by o8G are concentrated in Focal adhesion signaling pathway, Small cell lung cancer signaling pathway and Proteoglycans in cancer signaling pathway.

Conclusion: This study preliminarily revealed the different distribution patterns of o8G modification between normal CaCO2 cells and senescent CaCO2 cells. Our study established the link between o8G modification and cancer cell senescence, which provides a new insight into the mechanism of cancer cell senescence and a potential therapeutic target for subsequent cancer treatment.

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来源期刊
Frontiers in Cell and Developmental Biology
Frontiers in Cell and Developmental Biology Biochemistry, Genetics and Molecular Biology-Cell Biology
CiteScore
9.70
自引率
3.60%
发文量
2531
审稿时长
12 weeks
期刊介绍: Frontiers in Cell and Developmental Biology is a broad-scope, interdisciplinary open-access journal, focusing on the fundamental processes of life, led by Prof Amanda Fisher and supported by a geographically diverse, high-quality editorial board. The journal welcomes submissions on a wide spectrum of cell and developmental biology, covering intracellular and extracellular dynamics, with sections focusing on signaling, adhesion, migration, cell death and survival and membrane trafficking. Additionally, the journal offers sections dedicated to the cutting edge of fundamental and translational research in molecular medicine and stem cell biology. With a collaborative, rigorous and transparent peer-review, the journal produces the highest scientific quality in both fundamental and applied research, and advanced article level metrics measure the real-time impact and influence of each publication.
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