系统发育分析和传播网络强调了中国浙江北部老年人在HIV-1传播中的作用。

IF 4 3区 医学 Q2 VIROLOGY
Wanjun Chen, Qin Fan, Wei Cheng, Jiafeng Zhang, Lin He, Jun Jiang, Xiaoqi Liu, Xiaojuan Zhu, Hui Xing, Yi Feng, Ping Zhong, Xiaohong Pan, Chengliang Chai
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引用次数: 0

摘要

背景:在中国,人类免疫缺陷病毒(HIV)对老年异性恋成年人构成了重大挑战。本研究通过系统发育分析和传播网络研究了中国浙江省北部老年人中HIV感染的传播动态。方法:获取湖州市2017 - 2022年新诊断HIV阳性患者未经抗逆转录病毒治疗的HIV pol序列。利用基于Tamura-Nei 93方法的HIV Trace计算序列间的成对遗传距离。传输网络使用Cytoscape v3.9.1构建。利用BEAST v2.4.2中的出生-死亡天际线模型估计了每个大集群的有效繁殖数(Re)。使用R v4.4.3软件进行多因素逻辑回归,以确定与聚类相关的因素。结果:共获得931条HIV pol序列,其中CRF07_BC(51.7%, 481/931)和CRF01_AE(27.5%, 256/931)为优势亚型。CRF07_BC的比例从2017年的43.5%上升到2022年的59.8%,而CRF01_AE的比例从2017年的33.3%下降到2022年的19.5%。448个个体共形成110个推定传播网络,聚类率为48.1%,每个网络2 ~ 83个序列。发现了4个大型聚集性病例,年龄≥50岁的个体比例(49.0%)高于中小型聚集性病例(35.5%)和非聚集性病例(26.1%)。多变量logistic回归分析显示,聚类与年龄≥50岁(调整优势比[aOR] = 2.125, 95%可信区间[CI]: 1.251 ~ 3.632)、湖州户籍(aOR: 1.677, 95% CI: 1.252 ~ 2.249)、CRF07_BC亚型(aOR: 2.119, 95% CI: 1.542 ~ 2.924)相关。在4个大型传播聚集群中,只有1个具有Re bbb1,通过商业性接触暴露的男性老年人比例很高(63.0%,29/46)。结论:CRF07_BC亚型为局部优势亚型,随时间推移呈上升趋势。分子传播网络分析和多因素logistic回归分析表明,老年人在HIV-1局部传播中起关键作用。公共卫生服务应以这一关键人群为目标,遏制艾滋病毒-1的传播。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Phylogenetic analysis and transmission networks highlight the role of older adults in the transmission of HIV-1 in northern Zhejiang, China.

Background: In China, human immunodeficiency virus (HIV) poses a significant challenge to older heterosexual adults. This study explored the transmission dynamics of HIV infection among older adults in northern Zhejiang Province, China using phylogenetic analysis and transmission networks.

Methods: HIV pol sequences without any antiretroviral therapy were obtained from newly diagnosed HIV-positive patients in Huzhou between 2017 and 2022. Pairwise genetic distances between sequences were calculated using HIV Trace based on the Tamura-Nei 93 method. The transmission network was constructed using Cytoscape v3.9.1. The effective reproductive number (Re) of each large cluster was estimated using the birth-death skyline model in BEAST v2.4.2. Multivariate logistic regression was performed to identify factors associated with clustering using R v4.4.3 software.

Results: A total of 931 HIV pol sequences were successfully obtained, of which CRF07_BC (51.7%, 481/931) and CRF01_AE (27.5%, 256/931) were the predominant subtypes. The proportion of CRF07_BC increased from 43.5% in 2017 to 59.8% in 2022, whereas that of CRF01_AE decreased from 33.3% in 2017 to 19.5% in 2022. In total, 448 individuals formed 110 putative transmission networks with a clustering rate of 48.1%, ranging from 2 to 83 sequences per network. Four large clusters were identified, with a higher proportion of individuals aged ≥ 50 years (49.0%) compared to that in small/ medium clusters (35.5%) and non-clustered cases (26.1%). Multivariable logistic regression showed that clustering was associated with age ≥ 50 years (adjusted odds ratio [aOR] = 2.125, 95% confidence interval [CI]: 1.251-3.632), registered households in Huzhou (aOR: 1.677, 95% CI: 1.252-2.249), and CRF07_BC subtype (aOR: 2.119, 95% CI: 1.542-2.924). Only one of the four large transmission clusters had a Re > 1, with a high proportion (63.0%, 29/46) of male older adults exposed through commercial sexual contact.

Conclusions: The subtype of CRF07_BC was the predominant subtype locally, showing an increasing trend over time. Molecular transmission network analysis and multivariate logistic regression revealed that older adults play a key role in local HIV-1 transmission. Public health services should target this key population to curb the spread of HIV-1.

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来源期刊
Virology Journal
Virology Journal 医学-病毒学
CiteScore
7.40
自引率
2.10%
发文量
186
审稿时长
1 months
期刊介绍: Virology Journal is an open access, peer reviewed journal that considers articles on all aspects of virology, including research on the viruses of animals, plants and microbes. The journal welcomes basic research as well as pre-clinical and clinical studies of novel diagnostic tools, vaccines and anti-viral therapies. The Editorial policy of Virology Journal is to publish all research which is assessed by peer reviewers to be a coherent and sound addition to the scientific literature, and puts less emphasis on interest levels or perceived impact.
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