设计单聚合物链纳米颗粒模拟生物分子水合挫折

IF 20.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Tianyi Jin, Connor W. Coley, Alfredo Alexander-Katz
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引用次数: 0

摘要

天然折叠蛋白依赖于雕刻其活性或结合位点的局部化学环境,以及它们的形状,以实现功能。特别是,蛋白质利用水合挫折——控制亲水残基的脱水和疏水残基的水合——来增强它们的化学或结合活性。在这里,我们发现由包含四种或更多组分的随机杂聚物形成的单链聚合物纳米颗粒可以显示类似水平的水化挫折。我们将这些纳米颗粒分为三种类型,基于疏水或亲水性残基,或两者都显示受挫状态。我们提出了一系列的物理化学规则来决定这些纳米粒子的状态。我们在具有不同骨架和残基的单聚合物链纳米粒子的原子和简化蒙特卡罗模型中证明了这些规则的普遍性。我们的工作为单链纳米颗粒的设计提供了见解,单链纳米颗粒是一种新兴的聚合物形态,它实现了具有生物蛋白质功能的聚合物材料的制造的便利性和成本。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Designing single-polymer-chain nanoparticles to mimic biomolecular hydration frustration

Designing single-polymer-chain nanoparticles to mimic biomolecular hydration frustration

Native folded proteins rely on sculpting the local chemical environment of their active or binding sites, as well as their shapes, to achieve functionality. In particular, proteins use hydration frustration—control over the dehydration of hydrophilic residues and the hydration of hydrophobic residues—to amplify their chemical or binding activity. Here we uncover that single-polymer-chain nanoparticles formed by random heteropolymers comprising four or more components can display similar levels of hydration frustration. We categorize these nanoparticles into three types based on whether either hydrophobic or hydrophilic residues, or both types, display frustrated states. We propose a series of physicochemical rules that determine the state of these nanoparticles. We demonstrate the generality of these rules in atomistic and simplified Monte Carlo models of single-polymer-chain nanoparticles with different backbones and residues. Our work provides insights into the design of single-chain nanoparticles, an emerging polymer modality that achieves the ease and cost of fabrication of polymeric material with the functionality of biological proteins.

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来源期刊
Nature chemistry
Nature chemistry 化学-化学综合
CiteScore
29.60
自引率
1.40%
发文量
226
审稿时长
1.7 months
期刊介绍: Nature Chemistry is a monthly journal that publishes groundbreaking and significant research in all areas of chemistry. It covers traditional subjects such as analytical, inorganic, organic, and physical chemistry, as well as a wide range of other topics including catalysis, computational and theoretical chemistry, and environmental chemistry. The journal also features interdisciplinary research at the interface of chemistry with biology, materials science, nanotechnology, and physics. Manuscripts detailing such multidisciplinary work are encouraged, as long as the central theme pertains to chemistry. Aside from primary research, Nature Chemistry publishes review articles, news and views, research highlights from other journals, commentaries, book reviews, correspondence, and analysis of the broader chemical landscape. It also addresses crucial issues related to education, funding, policy, intellectual property, and the societal impact of chemistry. Nature Chemistry is dedicated to ensuring the highest standards of original research through a fair and rigorous review process. It offers authors maximum visibility for their papers, access to a broad readership, exceptional copy editing and production standards, rapid publication, and independence from academic societies and other vested interests. Overall, Nature Chemistry aims to be the authoritative voice of the global chemical community.
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