Hsa_circ_0006006是非小细胞肺癌预后和顺铂耐药的潜在生物标志物。

IF 2.7 3区 生物学
Min Ding, Jing Zhao, XiaoNa Li
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引用次数: 0

摘要

背景与目的:铂类药物,如顺铂(DDP),是标准的治疗方法,但耐药已成为一个关键挑战。先前的研究表明hsa_circ_0006006促进非小细胞肺癌(NSCLC)的进展。本研究旨在揭示特异性环状rna在非小细胞肺癌DDP耐药中的作用及其潜在的临床应用。方法:基于匹配人类NSCLC肺样本中CircRNA微阵列表达谱和匹配邻近样本以及原始矩阵数据和平台注释数据的条件,从GEO数据库中提取3个NSCLC组织和3个正常组织样本的CircRNA测序数据,并使用R语言进行差异表达分析。结果:hsa_circ_0006006表达异常升高与NSCLC生存预后及DDP耐药密切相关(P)结论:非小细胞肺癌生存预后与hsa_circ_0006006表达异常相关,hsa_circ_0006006表达异常调节NSCLC细胞增殖和凋亡,从而促进DDP耐药。这些发现为患者预后和评估对DDP治疗反应的生物标志物提供了潜在的靶点,可用于帮助早期诊断和预后评估,以及为未来开发相关小分子抑制剂或核酸药物提供了新的选择。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Hsa_circ_0006006 is a potential biomarker for prognosis and cisplatin resistance in non-small cell lung cancer.

Background and objective: Platinum-based drugs, such as cisplatin (DDP), are the standard treatment, yet drug resistance has become a key challenge. Previous studies have shown that hsa_circ_0006006 promotes non small cell lung cancer (NSCLC) progression. This study aimed to reveal the role of specific circRNAs in DDP resistance in NSCLC and their potential clinical applications.

Methods: CircRNA sequencing data of three NSCLC tissue and three normal tissue samples were extracted from the GEO database based on conditions that matched the microarray expression profiles of circRNAs from human NSCLC lung samples and matched neighboring samples and raw matrix data and platform annotation data, and differential expression analysis was performed using the R language. Log2 Fold change > 1 and P < 0.05 were labeled as differential genes. Serum samples were collected from 31 NSCLC patients and 21 DDP-resistant NSCLC patients. The Kaplan-Meier method was used to detect the correlation between circRNA levels and survival prognosis of NSCLC patients. The relationship between circRNAs and clinicopathological characteristics of patients was assessed by chi-square test. RT-qPCR was performed to detect the expression of key circRNAs associated with DDP drug resistance. circRNAs were analyzed by ROC curves to assess the diagnostic potential. A549 cells and A549/DDP cells were cultured to verify the effect of up- and down-regulation of hsa_circ_0006006 on DDP drug resistance in NSCLC cells using colony formation assay and flow cytometry.

Results: Abnormally elevated hsa_circ_0006006 expression was closely associated with NSCLC survival prognosis as well as DDP resistance (p < 0.05) with good diagnostic efficacy (AUC for NSCLC = 0.91, p < 0.01; AUC for DDP resistant = 0.80, p = 0.00). This was further validated in the analysis of clinical samples (p < 0.05). Knockdown of hsa_circ_0006006 significantly reduced DDP resistance in NSCLC cells, while overexpression of hsa_circ_0006006 had the opposite effect (p < 0.05).

Conclusion: NSCLC survival prognosis is associated with aberrant expression of hsa_circ_0006006, which regulates NSCLC cell proliferation and apoptosis and thus promotes DDP drug resistance. These findings provide potential targets for patient prognosis and assessment of biomarkers of response to DDP therapies that can be used to aid in early diagnosis and prognostic assessment, as well as new options for the future development of relevant small-molecule inhibitors or nucleic acid drugs.

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来源期刊
Hereditas
Hereditas Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.80
自引率
3.70%
发文量
0
期刊介绍: For almost a century, Hereditas has published original cutting-edge research and reviews. As the Official journal of the Mendelian Society of Lund, the journal welcomes research from across all areas of genetics and genomics. Topics of interest include human and medical genetics, animal and plant genetics, microbial genetics, agriculture and bioinformatics.
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