PCBP2通过cGAS-STING途径促进前列腺癌生化复发的免疫逃避。

IF 6.6 3区 医学 Q1 ENGINEERING, BIOMEDICAL
APL Bioengineering Pub Date : 2025-03-05 eCollection Date: 2025-03-01 DOI:10.1063/5.0250173
Zeng Zhou, Tiewen Li, Yichen Zhang, Xuehao Zhou, Xiaodong Song, Shiyu Ji, Yishu Huang, Yu Zhang, Yuan Ruan
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引用次数: 0

摘要

免疫治疗抵抗是前列腺癌(PCa)治疗的一个重要障碍,主要是由于免疫逃避机制。本研究旨在探索前列腺癌中癌症固有免疫逃避相关基因(CIERGs),并建立生化复发(BCR)的预测特征。大量RNA-seq数据和单细胞RNA-seq (scRNA-seq)数据来自TCGA和Gene Expression Omnibus数据库。scRNA-seq数据分析显示,与正常细胞相比,肿瘤细胞的免疫逃避评分更高。来自TCGA-PRAD和GSE70769队列的差异表达基因与182个核心免疫逃避基因相交,然后进行单变量Cox回归,鉴定出48个与BCR显著相关的CIERGs。非负矩阵分解(NMF)聚类揭示了两种与免疫逃避相关的PCa亚型。使用LASSO回归建立基于CIERGs的风险特征,并创建nomogram来预测无bcr生存期。在已鉴定的48个CIERGs中,聚(C)结合蛋白2 (PCBP2)是PCa预后不良的关键危险因素,其功能在体外得到验证。NMF聚类鉴定出两种亚型,其中C1亚型预后较差。基因集变异分析强调了C1亚型在细胞周期、细胞外基质受体相互作用和转化生长因子- β信号通路中的富集。基于ciergs的风险特征,包括六个关键基因,开发并验证了nomogram预测准确度高。体外实验表明PCBP2通过抑制环GMP-AMP合成酶- sting通路促进PCa细胞增殖、迁移和侵袭。CIERGs特征提供了BCR的精确预测,PCBP2由于其抑制PCa中的cGAS-STING途径而成为潜在的治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
PCBP2 promotes immune evasion via cGAS-STING pathway in biochemical recurrence of prostate cancer.

Immunotherapy resistance is a significant obstacle in the treatment of prostate cancer (PCa), primarily due to immune evasion mechanisms. This study aims to explore cancer-intrinsic immune evasion-related genes (CIERGs) in PCa and develop a predictive signature for biochemical recurrence (BCR). Bulk RNA-seq data and single-cell RNA-sequencing (scRNA-seq) were obtained from TCGA and Gene Expression Omnibus database. The scRNA-seq data analysis revealed higher immune evasion scores in tumor cells compared to normal cells. Differentially expressed genes from TCGA-PRAD and GSE70769 cohorts were intersected with 182 core immune evasion genes, followed by univariate Cox regression, identifying 48 CIERGs significantly associated with BCR. Nonnegative matrix factorization (NMF) clustering revealed two immune evasion-related PCa subtypes. A risk signature based on CIERGs was developed using LASSO regression, and a nomogram was created to predict BCR-free survival. Among the 48 identified CIERGs, poly(C)-binding protein 2 (PCBP2) emerged as a key risk factor associated with poor prognosis in PCa, and its function was validated in vitro. NMF clustering identified two subtypes, with the C1 subtype having a poorer prognosis. Gene Set Variation Analysis highlighted enrichment in cell cycle, extracellular matrix receptor interaction, and transforming growth factor-beta signaling pathways in the C1 subtype. A CIERGs-based risk signature, including six key genes, was developed and validated, with the nomogram showing high predictive accuracy. In vitro experiments showed PCBP2 promotes PCa cell proliferation, migration, and invasion by inhibiting the cyclic GMP-AMP synthase-STING pathway. The CIERGs signature provides a precise prediction of BCR, with PCBP2 emerging as a potential therapeutic target due to its inhibition of the cGAS-STING pathway in PCa.

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来源期刊
APL Bioengineering
APL Bioengineering ENGINEERING, BIOMEDICAL-
CiteScore
9.30
自引率
6.70%
发文量
39
审稿时长
19 weeks
期刊介绍: APL Bioengineering is devoted to research at the intersection of biology, physics, and engineering. The journal publishes high-impact manuscripts specific to the understanding and advancement of physics and engineering of biological systems. APL Bioengineering is the new home for the bioengineering and biomedical research communities. APL Bioengineering publishes original research articles, reviews, and perspectives. Topical coverage includes: -Biofabrication and Bioprinting -Biomedical Materials, Sensors, and Imaging -Engineered Living Systems -Cell and Tissue Engineering -Regenerative Medicine -Molecular, Cell, and Tissue Biomechanics -Systems Biology and Computational Biology
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