Daniel Wasner, Xingguo Han, Joerg Schnecker, Aline Frossard, Erick Zagal Venegas, Sebastian Doetterl
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引用次数: 0
摘要
从区域到全球范围内,土壤有机质(SOM)的数量驱动着土壤细菌群落的组成。众所周知,在操作实验中,SOM 的质量特征会影响土壤细菌群落。然而,SOM 的特征在宏观尺度上对土壤细菌群落组成的影响有多大仍未解决。在这里,我们研究了 SOM 的数量和质量特征如何影响草原土壤生物地球化学梯度上的群落组成。我们评估了土壤细菌的相对丰度模式,并根据可扩展的方法确定了 SOM 的特征。SOM 含量较高(SOC 含量在 0.6% 到 18.7% 之间)、pH 值偏酸(pH 值在 4.1-6.7 之间)的土壤中,分布较窄的类群(即在少数地点出现的类群)较少,因此细菌阿尔法多样性较低。我们可以解释这些土壤中细菌群落组成的较大部分(高达 16S rRNA 读数的 59.6%)。因此,与高 SOM 土壤相比,我们对低 SOM 土壤中群落组成的了解要少一些,因为我们对狭窄分布类群的驱动因素仍然知之甚少。定性的 SOM 特征对广泛分布的土壤细菌类群的生物地理格局影响不大。这表明,在调查的宏观尺度上,SOM 质量的广泛方面并不主导土壤细菌群落的组成。
Quantity Versus Quality: Links Between Soil Organic Matter and Bacterial Community Composition Along a Geoclimatic Gradient
Soil organic matter (SOM) quantity drives soil bacterial community composition from the regional to global scale. Qualitative characteristics of SOM are known to affect soil bacterial communities in manipulation experiments. However, it remains unresolved how strongly SOM characteristics affect soil bacterial community composition at the macroscale. Here, we investigated how quantity versus qualitative characteristics of SOM shape community composition along a biogeochemical gradient of grassland soils. We assessed relative abundance patterns of soil bacteria and characterised SOM based on scalable methods. Soils with higher SOM content (along a continuum between 0.6% and 18.7% SOC) and acidic pH (along a continuum between pH 4.1–6.7) hosted fewer narrowly distributed taxa (i.e., taxa occurring in few sites) and therefore had lower bacterial alpha diversity. We could explain a larger fraction of bacterial community composition (up to 59.6% of 16S rRNA reads) in these soils. Consequently, we understand community composition in low-SOM soils less than in high-SOM soils, because the drivers of narrowly distributed taxa remain poorly understood. Qualitative SOM characteristics did not strongly affect biogeographical patterns of widely distributed soil bacterial taxa. This suggests that broad aspects of SOM quality do not dominate soil bacterial community composition at the investigated macroscale.
期刊介绍:
Environmental Microbiology provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following:
the structure, activities and communal behaviour of microbial communities
microbial community genetics and evolutionary processes
microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors
microbes in the tree of life, microbial diversification and evolution
population biology and clonal structure
microbial metabolic and structural diversity
microbial physiology, growth and survival
microbes and surfaces, adhesion and biofouling
responses to environmental signals and stress factors
modelling and theory development
pollution microbiology
extremophiles and life in extreme and unusual little-explored habitats
element cycles and biogeochemical processes, primary and secondary production
microbes in a changing world, microbially-influenced global changes
evolution and diversity of archaeal and bacterial viruses
new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens