利用机器学习算法确定与阿尔茨海默病和铁蛋白沉积相关基因有关的生物标记物。

IF 1.4 4区 医学 Q4 ENGINEERING, BIOMEDICAL
Di Wang, Chunsheng Lin, Gang Liu, Xin Wang, Shengwang Han, Zengxin Han
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引用次数: 0

摘要

背景:阿尔茨海默病(AD)是一种复杂的神经退行性疾病,使我们对其起源的理解复杂化。识别ad特异性生物标志物可以揭示其机制,促进创新诊断和治疗的发展,旨在找到对抗这种普遍疾病的新方法。方法:我们使用加权基因共表达网络分析(WGCNA)和机器学习(随机森林、lasso回归和SVM-REF)分析基因表达数据,以区分AD患者和对照组,并探索基因功能。结果:我们鉴定了641个差异表达基因(DEGs)和22个共表达基因,功能富集分析揭示了它们参与免疫应答。值得注意的是,EGR1成为潜在的诊断和治疗靶点。结论:在我们的研究中,我们应用WGCNA、DEGs和多种机器学习方法来发现与阿尔茨海默病(AD)和铁下垂相关的潜在生物标志物。一个特殊的枢纽基因出现了一个有希望的候选新的诊断和治疗标志物,特别是在AD铁下垂的背景下。这一发现揭示了阿尔茨海默病的发病机制,有可能促进突破性诊断和治疗技术的发展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Utilizing machine learning algorithms to identify biomarkers associated with Alzheimer's disease and ferroptosis-related genes.

Background: Alzheimer's disease (AD) is a complex neurodegenerative disorder that complicates our understanding of its origins. Identifying AD-specific biomarkers can reveal its mechanisms and foster the development of innovative diagnostics and therapies, aiming to unlock new ways to combat this pervasive condition.

Methods: We analyzed gene expression data using Weighted Gene Co-expression Network Analysis (WGCNA) and machine learning (random forest, lasso regression, and SVM-REF) to differentiate AD patients from controls and explore gene functions.

Results: We identified 641 differentially expressed genes (DEGs) and 22 co-expressed genes, with functional enrichment analysis revealing their involvement in immune responses. Notably, EGR1 emerged as a potential diagnostic and therapeutic target.

Conclusion: In our study, we applied WGCNA, DEGs and diverse machine learning approaches to uncover potential biomarkers linked to Alzheimer's Disease (AD) and ferroptosis. A particular hub gene emerged as a promising candidate for novel diagnostic and therapeutic markers specifically within the context of ferroptosis in AD. This discovery sheds new light on the pathogenesis of AD, potentially facilitating the development of groundbreaking diagnostic and therapeutic techniques.

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来源期刊
Technology and Health Care
Technology and Health Care HEALTH CARE SCIENCES & SERVICES-ENGINEERING, BIOMEDICAL
CiteScore
2.10
自引率
6.20%
发文量
282
审稿时长
>12 weeks
期刊介绍: Technology and Health Care is intended to serve as a forum for the presentation of original articles and technical notes, observing rigorous scientific standards. Furthermore, upon invitation, reviews, tutorials, discussion papers and minisymposia are featured. The main focus of THC is related to the overlapping areas of engineering and medicine. The following types of contributions are considered: 1.Original articles: New concepts, procedures and devices associated with the use of technology in medical research and clinical practice are presented to a readership with a widespread background in engineering and/or medicine. In particular, the clinical benefit deriving from the application of engineering methods and devices in clinical medicine should be demonstrated. Typically, full length original contributions have a length of 4000 words, thereby taking duly into account figures and tables. 2.Technical Notes and Short Communications: Technical Notes relate to novel technical developments with relevance for clinical medicine. In Short Communications, clinical applications are shortly described. 3.Both Technical Notes and Short Communications typically have a length of 1500 words. Reviews and Tutorials (upon invitation only): Tutorial and educational articles for persons with a primarily medical background on principles of engineering with particular significance for biomedical applications and vice versa are presented. The Editorial Board is responsible for the selection of topics. 4.Minisymposia (upon invitation only): Under the leadership of a Special Editor, controversial or important issues relating to health care are highlighted and discussed by various authors. 5.Letters to the Editors: Discussions or short statements (not indexed).
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