Auwal Salisu Isa, Adamu Uzairu, Umar Meleh Umar, Muhammad Tukur Ibrahim, Abdullahi Bello Umar, Kamal Tabti, Abdussamad Mukhtar Mohammed
{"title":"新型egfr靶向化合物的芯片探索:整合分子建模、对接、药代动力学和MD模拟,以推进抗宫颈癌治疗。","authors":"Auwal Salisu Isa, Adamu Uzairu, Umar Meleh Umar, Muhammad Tukur Ibrahim, Abdullahi Bello Umar, Kamal Tabti, Abdussamad Mukhtar Mohammed","doi":"10.1038/s41598-025-91135-4","DOIUrl":null,"url":null,"abstract":"<p><p>Cervical cancer continues to pose a significant health challenge, especially in resource-limited settings, highlighting the need for the development of novel therapeutic agents. This study investigates the potential of 2,4-diphenyl indenol [1,2-b] pyridinol derivatives as inhibitors targeting the epidermal growth factor receptor (EGFR) through computational drug discovery methods. A genetic algorithm-multiple linear regression (GA-MLR) model was created, achieving strong predictive accuracy with R² = 0.9243, Q² = 0.8957, CCC = 0.9021, and MAE = 0.034. Molecular docking studies indicated that ligand 57 displayed the highest binding affinity of -29.2313 kcal/mol, followed by ligands 111 (-29.1459 kcal/mol) and 110 (-29.9082 kcal/mol), all of which stabilize key EGFR residues. Molecular dynamics (MD) simulations confirmed the stability of ligand 111, showing an improved binding free energy of -18.2235 kcal/mol. Additionally, pharmacokinetic analysis further validated their favorable ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) properties, supporting their potential as drug-like candidates. These findings establish a strong foundation for the development of EGFR-targeted therapies for cervical cancer.</p>","PeriodicalId":21811,"journal":{"name":"Scientific Reports","volume":"15 1","pages":"7334"},"PeriodicalIF":3.9000,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11873266/pdf/","citationCount":"0","resultStr":"{\"title\":\"In silico exploration of novel EGFR-targeting compounds: integrative molecular modeling, docking, pharmacokinetics, and MD simulations for advancing anti-cervical cancer therapeutics.\",\"authors\":\"Auwal Salisu Isa, Adamu Uzairu, Umar Meleh Umar, Muhammad Tukur Ibrahim, Abdullahi Bello Umar, Kamal Tabti, Abdussamad Mukhtar Mohammed\",\"doi\":\"10.1038/s41598-025-91135-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Cervical cancer continues to pose a significant health challenge, especially in resource-limited settings, highlighting the need for the development of novel therapeutic agents. This study investigates the potential of 2,4-diphenyl indenol [1,2-b] pyridinol derivatives as inhibitors targeting the epidermal growth factor receptor (EGFR) through computational drug discovery methods. A genetic algorithm-multiple linear regression (GA-MLR) model was created, achieving strong predictive accuracy with R² = 0.9243, Q² = 0.8957, CCC = 0.9021, and MAE = 0.034. Molecular docking studies indicated that ligand 57 displayed the highest binding affinity of -29.2313 kcal/mol, followed by ligands 111 (-29.1459 kcal/mol) and 110 (-29.9082 kcal/mol), all of which stabilize key EGFR residues. Molecular dynamics (MD) simulations confirmed the stability of ligand 111, showing an improved binding free energy of -18.2235 kcal/mol. Additionally, pharmacokinetic analysis further validated their favorable ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) properties, supporting their potential as drug-like candidates. These findings establish a strong foundation for the development of EGFR-targeted therapies for cervical cancer.</p>\",\"PeriodicalId\":21811,\"journal\":{\"name\":\"Scientific Reports\",\"volume\":\"15 1\",\"pages\":\"7334\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11873266/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Scientific Reports\",\"FirstCategoryId\":\"103\",\"ListUrlMain\":\"https://doi.org/10.1038/s41598-025-91135-4\",\"RegionNum\":2,\"RegionCategory\":\"综合性期刊\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Scientific Reports","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.1038/s41598-025-91135-4","RegionNum":2,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
In silico exploration of novel EGFR-targeting compounds: integrative molecular modeling, docking, pharmacokinetics, and MD simulations for advancing anti-cervical cancer therapeutics.
Cervical cancer continues to pose a significant health challenge, especially in resource-limited settings, highlighting the need for the development of novel therapeutic agents. This study investigates the potential of 2,4-diphenyl indenol [1,2-b] pyridinol derivatives as inhibitors targeting the epidermal growth factor receptor (EGFR) through computational drug discovery methods. A genetic algorithm-multiple linear regression (GA-MLR) model was created, achieving strong predictive accuracy with R² = 0.9243, Q² = 0.8957, CCC = 0.9021, and MAE = 0.034. Molecular docking studies indicated that ligand 57 displayed the highest binding affinity of -29.2313 kcal/mol, followed by ligands 111 (-29.1459 kcal/mol) and 110 (-29.9082 kcal/mol), all of which stabilize key EGFR residues. Molecular dynamics (MD) simulations confirmed the stability of ligand 111, showing an improved binding free energy of -18.2235 kcal/mol. Additionally, pharmacokinetic analysis further validated their favorable ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) properties, supporting their potential as drug-like candidates. These findings establish a strong foundation for the development of EGFR-targeted therapies for cervical cancer.
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