河北省兔源戊型肝炎病毒(Balayani Paslahepevirus)的流行及遗传特征分析

IF 4.1 2区 农林科学 Q2 ENVIRONMENTAL SCIENCES
Xinyue Hu, Jinfeng Wang, Yinuo Wang, Libing Liu, Junjie Miao, Huan Ren, Jianchang Wang, Xiangdong Xu
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引用次数: 0

摘要

戊型肝炎病毒(Paslahepevirus balayani,简称HEV-3ra)是一种人畜共患病原体,在全球兔群中广泛分布。值得注意的是,在中国,兔子是仅次于猪的重要HEV宿主。新出现的证据表明,HEV-3ra具有跨越物种屏障并感染人类的能力。在此背景下,我们的调查旨在描述中国河北省商品兔的HEV感染状况和流行病学模式。我们在河北省四个地区收集了386份肝脏和100份粪便样本。利用逆转录定量聚合酶链式反应(RT-qPCR)和逆转录巢式PCR (RT-Nested PCR)检测这些标本中的HEV RNA,重点扩增开放阅读框2 (ORF2)的一个片段和完整基因组。在486份样本中,有73份HEV RNA检测呈阳性,总体阳性率为15.0%。肝脏和粪便标本阳性率分别为11.7%(45/386)和28.0%(28/100)。本研究成功获得38个ORF2部分序列和5个完整基因组序列。序列分析显示,全基因组序列与GenBank中HEV-3ra序列的核苷酸同源性为86.0 ~ 94.5%。系统发育分析证实所有菌株均属于HEV-3ra,且与先前报道的中国序列密切相关。本研究首次对河北省流行的HEV-3ra毒株进行了全面的基因组概述,为了解HEV-3ra在商品兔中的感染动态和流行情况提供了有价值的见解,可为公共卫生策略提供信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Uncovering the Prevalence and Genetic Characterization of Rabbit-Derived Paslahepevirus Balayani (Hepatitis E Virus) in Hebei Province, China

Paslahepevirus balayani (hepatitis E virus) is a zoonotic pathogen, with rabbit Paslahepevirus balayani (HEV-3ra) being widely distributed among global rabbit populations. Notably, in China, rabbits constitute a significant HEV host, second only to swine. Emerging evidence suggests that HEV-3ra possesses the capability to cross species barriers and infect humans. Against this backdrop, our investigation aimed to delineate the HEV infection status and epidemiological patterns in the commercial rabbits of Hebei Province, China. We collected 386 liver and 100 fecal samples across four regions in Hebei Province. Detection of HEV RNA in these specimens was achieved by employing reverse transcription quantitative polymerase chain reaction (RT-qPCR) and reverse transcription nested PCR (RT-Nested PCR), focusing on the amplification of a segment of the open reading frame 2 (ORF2) and the complete genome. Among the 486 samples, 73 were tested positive for HEV RNA, resulting in an overall positive rate of 15.0%. The positive rates for liver and fecal samples were 11.7% (45/386) and 28.0% (28/100), respectively. The study successfully obtained 38 partial ORF2 sequences and 5 complete genome sequences. Sequence analysis revealed that the complete genome sequences shared 86.0–94.5% nucleotide identity with HEV-3ra sequences in GenBank. Phylogenetic analysis confirmed that all strains belonged to HEV-3ra and were closely related to previously reported sequences from China. This study provides the first comprehensive genomic overview of circulating HEV-3ra strains in Hebei, offering valuable insights into the infection dynamics and prevalence of HEV-3ra among commercial rabbits, which can inform public health strategies.

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来源期刊
Food and Environmental Virology
Food and Environmental Virology ENVIRONMENTAL SCIENCES-MICROBIOLOGY
CiteScore
6.50
自引率
2.90%
发文量
35
审稿时长
1 months
期刊介绍: Food and Environmental Virology publishes original articles, notes and review articles on any aspect relating to the transmission of pathogenic viruses via the environment (water, air, soil etc.) and foods. This includes epidemiological studies, identification of novel or emerging pathogens, methods of analysis or characterisation, studies on survival and elimination, and development of procedural controls for industrial processes, e.g. HACCP plans. The journal will cover all aspects of this important area, and encompass studies on any human, animal, and plant pathogenic virus which is capable of transmission via the environment or food.
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