Min-Jae Kim, Hae-Jun Kim, Jin-Sung Hong, Rae-Dong Jeong
{"title":"纳米孔测序首次揭示一品红花花色病毒感染韩国大戟属植物的情况","authors":"Min-Jae Kim, Hae-Jun Kim, Jin-Sung Hong, Rae-Dong Jeong","doi":"10.1111/jph.70046","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>The poinsettia mosaic virus (PnMV) was first identified in <i>Euphorbia milii</i> in South Korea using nanopore sequencing; the complete genome of this isolate, named PnMV-CNU, has subsequently been assembled and characterised. The transcriptomic analysis results were further validated by RT-PCR using PnMV-specific primers and Sanger sequencing. The PnMV-CNU genome consisted of 6094 nucleotides, encoding a polyprotein with conserved domains typical of the <i>Tymoviridae</i> family, including methyltransferase, protease, helicase, RNA-dependent RNA polymerase and coat protein. Phylogenetic analysis demonstrated a close relationship between PnMV-CNU and other isolates, suggesting a broad geographical distribution of the virus. Mechanical inoculation of PnMV-CNU onto <i>Chenopodium album</i> confirmed its infectivity, resulting in systemic foliar necrosis on inoculated plants. To our knowledge, this study represents the first report of PnMV infecting <i>E. milii</i>, expanding the known host range of the virus and highlighting the importance of rapid diagnostic tools such as nanopore sequencing. These findings underscore the need for vigilant surveillance to mitigate the impact of PnMV on <i>Euphorbia</i> species.</p>\n </div>","PeriodicalId":16843,"journal":{"name":"Journal of Phytopathology","volume":"173 2","pages":""},"PeriodicalIF":1.1000,"publicationDate":"2025-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Nanopore Sequencing Reveals the First Report of Poinsettia Mosaic Virus Infecting Euphorbia milii in South Korea\",\"authors\":\"Min-Jae Kim, Hae-Jun Kim, Jin-Sung Hong, Rae-Dong Jeong\",\"doi\":\"10.1111/jph.70046\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n <p>The poinsettia mosaic virus (PnMV) was first identified in <i>Euphorbia milii</i> in South Korea using nanopore sequencing; the complete genome of this isolate, named PnMV-CNU, has subsequently been assembled and characterised. The transcriptomic analysis results were further validated by RT-PCR using PnMV-specific primers and Sanger sequencing. The PnMV-CNU genome consisted of 6094 nucleotides, encoding a polyprotein with conserved domains typical of the <i>Tymoviridae</i> family, including methyltransferase, protease, helicase, RNA-dependent RNA polymerase and coat protein. Phylogenetic analysis demonstrated a close relationship between PnMV-CNU and other isolates, suggesting a broad geographical distribution of the virus. Mechanical inoculation of PnMV-CNU onto <i>Chenopodium album</i> confirmed its infectivity, resulting in systemic foliar necrosis on inoculated plants. To our knowledge, this study represents the first report of PnMV infecting <i>E. milii</i>, expanding the known host range of the virus and highlighting the importance of rapid diagnostic tools such as nanopore sequencing. These findings underscore the need for vigilant surveillance to mitigate the impact of PnMV on <i>Euphorbia</i> species.</p>\\n </div>\",\"PeriodicalId\":16843,\"journal\":{\"name\":\"Journal of Phytopathology\",\"volume\":\"173 2\",\"pages\":\"\"},\"PeriodicalIF\":1.1000,\"publicationDate\":\"2025-02-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Phytopathology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/jph.70046\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Phytopathology","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/jph.70046","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Nanopore Sequencing Reveals the First Report of Poinsettia Mosaic Virus Infecting Euphorbia milii in South Korea
The poinsettia mosaic virus (PnMV) was first identified in Euphorbia milii in South Korea using nanopore sequencing; the complete genome of this isolate, named PnMV-CNU, has subsequently been assembled and characterised. The transcriptomic analysis results were further validated by RT-PCR using PnMV-specific primers and Sanger sequencing. The PnMV-CNU genome consisted of 6094 nucleotides, encoding a polyprotein with conserved domains typical of the Tymoviridae family, including methyltransferase, protease, helicase, RNA-dependent RNA polymerase and coat protein. Phylogenetic analysis demonstrated a close relationship between PnMV-CNU and other isolates, suggesting a broad geographical distribution of the virus. Mechanical inoculation of PnMV-CNU onto Chenopodium album confirmed its infectivity, resulting in systemic foliar necrosis on inoculated plants. To our knowledge, this study represents the first report of PnMV infecting E. milii, expanding the known host range of the virus and highlighting the importance of rapid diagnostic tools such as nanopore sequencing. These findings underscore the need for vigilant surveillance to mitigate the impact of PnMV on Euphorbia species.
期刊介绍:
Journal of Phytopathology publishes original and review articles on all scientific aspects of applied phytopathology in agricultural and horticultural crops. Preference is given to contributions improving our understanding of the biotic and abiotic determinants of plant diseases, including epidemics and damage potential, as a basis for innovative disease management, modelling and forecasting. This includes practical aspects and the development of methods for disease diagnosis as well as infection bioassays.
Studies at the population, organism, physiological, biochemical and molecular genetic level are welcome. The journal scope comprises the pathology and epidemiology of plant diseases caused by microbial pathogens, viruses and nematodes.
Accepted papers should advance our conceptual knowledge of plant diseases, rather than presenting descriptive or screening data unrelated to phytopathological mechanisms or functions. Results from unrepeated experimental conditions or data with no or inappropriate statistical processing will not be considered. Authors are encouraged to look at past issues to ensure adherence to the standards of the journal.