纳米孔测序首次揭示一品红花花色病毒感染韩国大戟属植物的情况

IF 1.1 4区 农林科学 Q3 PLANT SCIENCES
Min-Jae Kim, Hae-Jun Kim, Jin-Sung Hong, Rae-Dong Jeong
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引用次数: 0

摘要

利用纳米孔测序技术首次在韩国的 Euphorbia milii 中发现了一品红花叶病毒(PnMV);随后对该分离株(命名为 PnMV-CNU)的完整基因组进行了组装和表征。使用 PnMV 特异性引物进行 RT-PCR 和 Sanger 测序进一步验证了转录组分析结果。PnMV-CNU 基因组由 6094 个核苷酸组成,编码一个具有典型 Tymoviridae 家族保守结构域的多聚蛋白,包括甲基转移酶、蛋白酶、螺旋酶、RNA 依赖性 RNA 聚合酶和衣壳蛋白。系统进化分析表明,PnMV-CNU 与其他分离物之间关系密切,表明该病毒的地理分布广泛。将 PnMV-CNU 机械接种到白藜芦醇上证实了其感染性,导致接种植株全身叶片坏死。据我们所知,该研究是 PnMV 感染 E. milii 的首次报道,扩大了该病毒的已知宿主范围,突出了纳米孔测序等快速诊断工具的重要性。这些发现强调了警惕性监测的必要性,以减轻 PnMV 对大戟科植物的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Nanopore Sequencing Reveals the First Report of Poinsettia Mosaic Virus Infecting Euphorbia milii in South Korea

The poinsettia mosaic virus (PnMV) was first identified in Euphorbia milii in South Korea using nanopore sequencing; the complete genome of this isolate, named PnMV-CNU, has subsequently been assembled and characterised. The transcriptomic analysis results were further validated by RT-PCR using PnMV-specific primers and Sanger sequencing. The PnMV-CNU genome consisted of 6094 nucleotides, encoding a polyprotein with conserved domains typical of the Tymoviridae family, including methyltransferase, protease, helicase, RNA-dependent RNA polymerase and coat protein. Phylogenetic analysis demonstrated a close relationship between PnMV-CNU and other isolates, suggesting a broad geographical distribution of the virus. Mechanical inoculation of PnMV-CNU onto Chenopodium album confirmed its infectivity, resulting in systemic foliar necrosis on inoculated plants. To our knowledge, this study represents the first report of PnMV infecting E. milii, expanding the known host range of the virus and highlighting the importance of rapid diagnostic tools such as nanopore sequencing. These findings underscore the need for vigilant surveillance to mitigate the impact of PnMV on Euphorbia species.

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来源期刊
Journal of Phytopathology
Journal of Phytopathology 生物-植物科学
CiteScore
2.90
自引率
0.00%
发文量
88
审稿时长
4-8 weeks
期刊介绍: Journal of Phytopathology publishes original and review articles on all scientific aspects of applied phytopathology in agricultural and horticultural crops. Preference is given to contributions improving our understanding of the biotic and abiotic determinants of plant diseases, including epidemics and damage potential, as a basis for innovative disease management, modelling and forecasting. This includes practical aspects and the development of methods for disease diagnosis as well as infection bioassays. Studies at the population, organism, physiological, biochemical and molecular genetic level are welcome. The journal scope comprises the pathology and epidemiology of plant diseases caused by microbial pathogens, viruses and nematodes. Accepted papers should advance our conceptual knowledge of plant diseases, rather than presenting descriptive or screening data unrelated to phytopathological mechanisms or functions. Results from unrepeated experimental conditions or data with no or inappropriate statistical processing will not be considered. Authors are encouraged to look at past issues to ensure adherence to the standards of the journal.
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