greenfeedr:一个R包,用于处理和报告GreenFeed数据

Guillermo Martinez-Boggio , Patrick Lutz , Meredith Harrison , Kent A. Weigel , Francisco Peñagaricano
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引用次数: 0

摘要

牲畜产生的温室气体是造成气候变化的重要因素。使用GreenFeed系统测量牛大规模呼出的代谢气体的能力将帮助农民减少肠道排放,同时保持或提高牛的生产力。GreenFeed装置是便携式室内系统,可实时测量单个动物的气体产量。因此,这些机器会产生大量的日常数据,用户可能无法处理这些数据。这个挑战促使我们开发了一个名为greenfeedr的R包,它提供了下载、处理和报告GreenFeed数据的功能。在这里,我们描述了greenfeeder R包中实现的所有功能,并给出了基于奶牛数据的示例。R包具有下载GreenFeed数据(get_gfdata)、生成每日和最终报告(report_gfdata)、处理每日和最终记录(process_gfdata)的功能,以及帮助提取关于颗粒摄入量和每日访问(pellin和viseat)的信息的额外功能。使用32头泌乳奶牛的示例数据,我们演示了不同函数生成易于阅读的报告和处理大量数据的能力。此外,我们在函数process_gfdata中包含了一些参数,这些参数将帮助用户定义处理自己的GreenFeed数据的最佳标准。总的来说,greenfeedr代表了GreenFeed数据管理和分析方面的重要进步,为用户的需求提供了一个有效的工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
greenfeedr: An R package for processing and reporting GreenFeed data
Greenhouse gases produced by livestock are important contributors to climate change. The ability to measure large-scale exhaled metabolic gases from cattle using GreenFeed systems will help farmers to reduce enteric emissions while maintaining or increasing cow productivity. GreenFeed units are portable chamber systems that measure individual animal gas production in real time. Thus, the machines generate large amounts of daily data that can be overwhelming for users to process. This challenge motivated us to develop an R package named greenfeedr that offers functions for downloading, processing, and reporting GreenFeed data. Herein, we describe all functions implemented in the greenfeedr R package and present examples based on dairy cow data. The R package has functions for downloading GreenFeed data (get_gfdata), for generating daily and final reports (report_gfdata), for processing daily and final records (process_gfdata), and extra functions that help to extract information regarding pellet intakes and daily visits (pellin and viseat). Using our example data with 32 lactating dairy cows, we demonstrated the capabilities of the different functions to generate easy-to-read reports and process large amount of data. Also, we included in the function process_gfdata some parameters that will help users to define the best criteria to process their own GreenFeed data. Overall, greenfeedr represents an important advancement in the management and analysis of GreenFeed data, offering an efficient tool tailored to the needs of the user.
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来源期刊
JDS communications
JDS communications Animal Science and Zoology
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