从17个线粒体新基因组推断云南蝗科蝗虫的系统发育和进化动力学。

IF 2.9 2区 农林科学 Q1 ENTOMOLOGY
Insects Pub Date : 2025-02-03 DOI:10.3390/insects16020151
Keyao Zhang, Jing Song, Junhui Lu, Lu Zhao, Weian Deng, Delong Guan, Benyong Mao
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引用次数: 0

摘要

云南省是全球生物多样性的热点地区,拥有对生态系统动态和农业至关重要的各种蝗科蝗虫。为了进一步明确该类群的系统发育关系和进化史,我们对云南特有的17个Acrididae物种的线粒体全基因组进行了测序和分析,基因组长度在15,403 ~ 15,943个碱基对之间。这些数据与另外46个物种的线粒体序列相结合,构建了全面的系统发育树。最大似然树确定了4个主要的分支,具有强大的支持(bootstrap值为bb0 ~ 90%),揭示了早始新世(5194万年前)和随后中新世(~20万年前)和上新世(~5万年前)的显著谱系多样化。这些分异时间与该地区的重大地质事件和气候变化有关,例如青藏高原的隆起和亚洲季风的加强。值得注意的是,在Coptacrinae亚科和Oxyinae亚科中发现了一些物种,特别是Pseudodotraulia cornuata和Spathosternum prasiniferum,这表明有必要进行分类修订。进一步的密码子使用偏差和遗传距离聚类分析支持了这些对Acrididae的分类修正。这一强大的系统发育框架为保护云南丰富的蝗虫生物多样性提供了基础,并为其系统发育的更新提供了信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Phylogenetics and Evolutionary Dynamics of Yunnan Acrididae Grasshoppers Inferred from 17 New Mitochondrial Genomes.

Yunnan Province, a global biodiversity hotspot, hosts a diverse array of Acrididae grasshoppers essential for ecosystem dynamics and agriculture. To elucidate the phylogenetic relationships and evolutionary history of this group, we sequenced and analyzed complete mitochondrial genomes from 17 Acrididae species endemic to Yunnan, with genome lengths ranging from 15,403 to 15,943 base pairs. These data were integrated with mitochondrial sequences from 46 additional species to construct comprehensive phylogenetic trees. The maximum-likelihood tree identified four major clades with robust support (bootstrap values > 90%), revealing significant lineage diversification during the Early Eocene (51.94 million years ago, Mya) and subsequent radiations in the Miocene (~20 Mya) and Pliocene (~5 Mya). These divergence times correlate with major geological events and climatic shifts in the region, such as the uplift of the Tibetan Plateau and the intensification of the Asian monsoon. Notably, several species within the Coptacrinae and Oxyinae subfamilies, particularly Pseudodotraulia cornuata and Spathosternum prasiniferum, were found to be polyphyletic, indicating the necessity for taxonomic revisions. Further cluster analyses of codon usage bias and genetic distance support these taxonomic revisions within Acrididae. This robust phylogenetic framework underpins conservation strategies aimed at preserving Yunnan's rich grasshopper biodiversity and informs updates to their phylogeny.

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来源期刊
Insects
Insects Agricultural and Biological Sciences-Insect Science
CiteScore
5.10
自引率
10.00%
发文量
1013
审稿时长
21.77 days
期刊介绍: Insects (ISSN 2075-4450) is an international, peer-reviewed open access journal of entomology published by MDPI online quarterly. It publishes reviews, research papers and communications related to the biology, physiology and the behavior of insects and arthropods. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material.
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