{"title":"利用数据的全部力量来描述生物缩放关系","authors":"Milos Simovic, Sean T. Michaletz","doi":"10.1111/geb.70019","DOIUrl":null,"url":null,"abstract":"<div>\n \n \n <section>\n \n <h3> Describing Scaling Relationships</h3>\n \n <p>Scaling relationships are a central feature of global ecology, quantifying general biological patterns across broad spatial and temporal scales. Traditionally characterised as scale-invariant power laws, the scope of biological scaling has expanded in recent decades to include log–log curvilinearity and exponential functions. In macroecology and biogeography, a major focus is on quantifying these general relationships using empirical data, comparing observations across datasets and testing their consistency with theoretical predictions. This is typically accomplished by fitting linear models to log-transformed data, estimating slopes (representing scaling exponents or exponential rate constants) and 95% confidence intervals (CIs), and evaluating whether these CIs align with empirical observations or theoretical predictions.</p>\n </section>\n \n <section>\n \n <h3> Challenges of Existing Methods</h3>\n \n <p>The accuracy of general slope estimates depends critically on the distribution of data across the range of the abscissa. When observations are unevenly distributed, with clustering in some portions of the range, slope and CI estimates become biased toward regions of higher data density. This imbalance increases the risk of type I or II errors, potentially leading to erroneous conclusions in comparisons of data with observations or predictions.</p>\n </section>\n \n <section>\n \n <h3> Bootstrapping Enables Accurate Estimates of Scaling Relationships</h3>\n \n <p>We introduce a novel bootstrapping approach to address data imbalance in biological scaling analyses that improves the accuracy of general slope and CI estimates. This method enables more precise comparisons with empirical observations and theoretical predictions. We validate the approach by accurately reproducing a known slope from plant height-diameter data. Additionally, we demonstrate that fitting linear models to imbalanced and balanced metabolic rate-body mass data yields different slope estimates, leading to different conclusions regarding agreement between data and theory. Finally, we evaluate three common data processing methods and show that model fits to balanced data are superior for reliable quantification of general scaling relationships.</p>\n </section>\n </div>","PeriodicalId":176,"journal":{"name":"Global Ecology and Biogeography","volume":"34 2","pages":""},"PeriodicalIF":6.3000,"publicationDate":"2025-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/geb.70019","citationCount":"0","resultStr":"{\"title\":\"Harnessing the Full Power of Data to Characterise Biological Scaling Relationships\",\"authors\":\"Milos Simovic, Sean T. Michaletz\",\"doi\":\"10.1111/geb.70019\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n \\n <section>\\n \\n <h3> Describing Scaling Relationships</h3>\\n \\n <p>Scaling relationships are a central feature of global ecology, quantifying general biological patterns across broad spatial and temporal scales. Traditionally characterised as scale-invariant power laws, the scope of biological scaling has expanded in recent decades to include log–log curvilinearity and exponential functions. In macroecology and biogeography, a major focus is on quantifying these general relationships using empirical data, comparing observations across datasets and testing their consistency with theoretical predictions. This is typically accomplished by fitting linear models to log-transformed data, estimating slopes (representing scaling exponents or exponential rate constants) and 95% confidence intervals (CIs), and evaluating whether these CIs align with empirical observations or theoretical predictions.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Challenges of Existing Methods</h3>\\n \\n <p>The accuracy of general slope estimates depends critically on the distribution of data across the range of the abscissa. When observations are unevenly distributed, with clustering in some portions of the range, slope and CI estimates become biased toward regions of higher data density. This imbalance increases the risk of type I or II errors, potentially leading to erroneous conclusions in comparisons of data with observations or predictions.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Bootstrapping Enables Accurate Estimates of Scaling Relationships</h3>\\n \\n <p>We introduce a novel bootstrapping approach to address data imbalance in biological scaling analyses that improves the accuracy of general slope and CI estimates. This method enables more precise comparisons with empirical observations and theoretical predictions. We validate the approach by accurately reproducing a known slope from plant height-diameter data. Additionally, we demonstrate that fitting linear models to imbalanced and balanced metabolic rate-body mass data yields different slope estimates, leading to different conclusions regarding agreement between data and theory. Finally, we evaluate three common data processing methods and show that model fits to balanced data are superior for reliable quantification of general scaling relationships.</p>\\n </section>\\n </div>\",\"PeriodicalId\":176,\"journal\":{\"name\":\"Global Ecology and Biogeography\",\"volume\":\"34 2\",\"pages\":\"\"},\"PeriodicalIF\":6.3000,\"publicationDate\":\"2025-02-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1111/geb.70019\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Global Ecology and Biogeography\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/geb.70019\",\"RegionNum\":1,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Global Ecology and Biogeography","FirstCategoryId":"93","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/geb.70019","RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ECOLOGY","Score":null,"Total":0}
Harnessing the Full Power of Data to Characterise Biological Scaling Relationships
Describing Scaling Relationships
Scaling relationships are a central feature of global ecology, quantifying general biological patterns across broad spatial and temporal scales. Traditionally characterised as scale-invariant power laws, the scope of biological scaling has expanded in recent decades to include log–log curvilinearity and exponential functions. In macroecology and biogeography, a major focus is on quantifying these general relationships using empirical data, comparing observations across datasets and testing their consistency with theoretical predictions. This is typically accomplished by fitting linear models to log-transformed data, estimating slopes (representing scaling exponents or exponential rate constants) and 95% confidence intervals (CIs), and evaluating whether these CIs align with empirical observations or theoretical predictions.
Challenges of Existing Methods
The accuracy of general slope estimates depends critically on the distribution of data across the range of the abscissa. When observations are unevenly distributed, with clustering in some portions of the range, slope and CI estimates become biased toward regions of higher data density. This imbalance increases the risk of type I or II errors, potentially leading to erroneous conclusions in comparisons of data with observations or predictions.
Bootstrapping Enables Accurate Estimates of Scaling Relationships
We introduce a novel bootstrapping approach to address data imbalance in biological scaling analyses that improves the accuracy of general slope and CI estimates. This method enables more precise comparisons with empirical observations and theoretical predictions. We validate the approach by accurately reproducing a known slope from plant height-diameter data. Additionally, we demonstrate that fitting linear models to imbalanced and balanced metabolic rate-body mass data yields different slope estimates, leading to different conclusions regarding agreement between data and theory. Finally, we evaluate three common data processing methods and show that model fits to balanced data are superior for reliable quantification of general scaling relationships.
期刊介绍:
Global Ecology and Biogeography (GEB) welcomes papers that investigate broad-scale (in space, time and/or taxonomy), general patterns in the organization of ecological systems and assemblages, and the processes that underlie them. In particular, GEB welcomes studies that use macroecological methods, comparative analyses, meta-analyses, reviews, spatial analyses and modelling to arrive at general, conceptual conclusions. Studies in GEB need not be global in spatial extent, but the conclusions and implications of the study must be relevant to ecologists and biogeographers globally, rather than being limited to local areas, or specific taxa. Similarly, GEB is not limited to spatial studies; we are equally interested in the general patterns of nature through time, among taxa (e.g., body sizes, dispersal abilities), through the course of evolution, etc. Further, GEB welcomes papers that investigate general impacts of human activities on ecological systems in accordance with the above criteria.