[鉴定参与蒙古云杉对盐胁迫反应的MYB转录因子家族]。

Q4 Biochemistry, Genetics and Molecular Biology
Mingming Sui, Fuman Zhang, Tian Tian, Yanqiu Yan, Le Geng, Hui Li, Yu'e Bai
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引用次数: 0

摘要

蒙古云杉(Picea mongolica)以耐寒、耐旱、耐盐著称,是中国“三北”地区生态恢复和城市绿化的重要树种。MYB转录因子参与植物对非生物胁迫的响应和次生代谢产物的合成。然而,关于蒙古白栎MYB转录因子及其在耐盐胁迫中的作用的研究有限。本研究基于云杉基因组和蒙古云杉的转录组鉴定了196个myb。系统发育分析将MYB转录因子分为7个亚类。R2R3-MYB亚类所含基因数量最多(84.77%),R-R和R1R2R3亚类所占比例最小,约为0.51%。同一亚类中的MYB转录因子高度保守,表现出相似的基序和基因结构。不同盐胁迫梯度下的试验表明,蒙古松对盐胁迫的耐受性可达1 000 mmol/L。在盐胁迫(1 000 mmol/L)处理0、3、6、12和24 h的蒙古柽柳转录组数据中,共鉴定出34个差异表达的MYBs,表明这些MYBs在盐胁迫响应调控中起关键作用。这些差异表达基因编码的蛋白长度在89 ~ 731 aa之间,分子量在10.19 ~ 79.73 kDa之间,等电点在4.80 ~ 9.91之间,不稳定系数在41.20 ~ 70.99之间。亚细胞定位分析表明,大多数蛋白质定位在细胞核中,而在叶绿体中发现了三个。选择12个myb进行实时荧光定量PCR (qRT-PCR),结果显示它们的表达模式与RNA-seq数据一致。本研究为进一步研究蒙古矮杉树MYB家族成员在盐胁迫下的功能和机制提供了有价值的数据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Identification of the MYB transcription factor family involved in response to salt stress in Picea mongolica].

Picea mongolica, known for its remarkable tolerance to cold, drought, and salinity, is a key species for ecological restoration and urban greening in the "Three Norths" region of China. MYB transcription factors are involved in plant responses to abiotic stress and synthesis of secondary metabolites. However, studies are limited regarding the MYB transcription factors in P. mongolica and their roles in salt stress tolerance. In this study, 196 MYBs were identified based on the genome of Picea abies and the transcriptome of P. mongolica. Phylogenetic analysis classified the MYB transcription factors into seven subclasses. The R2R3-MYB subclass contained the maximum number of genes (84.77%), while the R-R and R1R2R3 subclasses each represented the smallest proportion, at about 0.51%. The MYB transcription factors within the same subclass were highly conserved, exhibiting similar motifs and gene structures. Experiments with varying salt stress gradients revealed that P. mongolica could tolerate the salt concentration up to 1 000 mmol/L. From the transcriptome data of P. mongolica exposed to salt stress (1 000 mmol/L) for 0, 3, 6, 12, and 24 h, a total of 34 differentially expressed MYBs were identified, which suggested that these MYBs played a key role in regulating the response to salt stress. The proteins encoded by these differentially expressed genes varied in length from 89 aa to 731 aa, with molecular weights ranging from 10.19 kDa to 79.73 kDa, isoelectric points between 4.80 and 9.91, and instability coefficients from 41.20 to 70.99. Subcellular localization analysis indicated that most proteins were localized in the nucleus, while three were found in the chloroplasts. Twelve MYBs were selected for quantitative real-time PCR (qRT-PCR), which showed that their expression patterns were consistent with the RNA-seq data. This study provides valuable data for further investigation into the functions and mechanisms of MYB family members in response to salt stress in P. mongolica.

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来源期刊
Sheng wu gong cheng xue bao = Chinese journal of biotechnology
Sheng wu gong cheng xue bao = Chinese journal of biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
1.50
自引率
0.00%
发文量
298
期刊介绍: Chinese Journal of Biotechnology (Chinese edition) , sponsored by the Institute of Microbiology, Chinese Academy of Sciences and the Chinese Society for Microbiology, is a peer-reviewed international journal. The journal is cited by many scientific databases , such as Chemical Abstract (CA), Biology Abstract (BA), MEDLINE, Russian Digest , Chinese Scientific Citation Index (CSCI), Chinese Journal Citation Report (CJCR), and Chinese Academic Journal (CD version). The Journal publishes new discoveries, techniques and developments in genetic engineering, cell engineering, enzyme engineering, biochemical engineering, tissue engineering, bioinformatics, biochips and other fields of biotechnology.
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