AQP1作为肿瘤生物标志物的综合潜力:来自肾脏肿瘤队列、细胞实验和泛癌分析的证据

IF 3.8 3区 医学 Q2 GENETICS & HEREDITY
Yifan Liu, Donghao Lyu, Yuntao Yao, Jinming Cui, Jiangui Liu, Zikuan Bai, Zihui Zhao, Yuanan Li, Bingnan Lu, Keqin Dong, Xiuwu Pan
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引用次数: 0

摘要

水通道蛋白1 (AQP1)促进水运。它在泛癌症水平上作为生物标志物的能力仍未得到研究。我们对370例肾肿瘤患者的组织进行了免疫组织化学染色,以测量AQP1的表达。我们采用Kaplan-Meier生存分析、卡方检验和多变量Cox回归分析来评估AQP1表达与预后的相关性。在泛癌背景下,我们探讨了AQP1的竞争内源rna网络、蛋白-蛋白相互作用、基因组变化、基因集富集分析(GSEA)、AQP1表达与生存结局、药物敏感性、药物分子对接、肿瘤纯度和免疫的相关性。建立表达786-O细胞的AQP1 shRNA。用细胞计数试剂盒-8检测细胞增殖和菌落形成。进行Transwell迁移、侵袭和细胞划伤试验。在我们的研究中,AQP1的表达是肾癌患者OS和PFS的独立保护因子。AQP1表达与肾癌、LGG、SARC、HNSC和UVM的生存结局显著相关。PI-103敏感性与AQP1表达有关,与AQP1蛋白有潜在的结合引用。敲低AQP1可减少细胞增殖、迁移和侵袭。我们的研究发现AQP1是肾癌有利生存结果的生物标志物。此外,生物信息学分析促进了其在泛癌范围内的应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The comprehensive potential of AQP1 as a tumor biomarker: evidence from kidney neoplasm cohorts, cell experiments and pan-cancer analysis.

Aquaporin1 (AQP1) facilitates water transport. Its ability to be a biomarker at the pan-cancer level remains uninvestigated. We performed immunohistochemical staining on tissues from 370 individuals with kidney neoplasms to measure AQP1 expression. We utilized Kaplan-Meier survival analysis, Chi-square tests, and multivariate Cox regression analyses to assess the prognostic relevance of AQP1 expression. In the pan-cancer context, we explored AQP1's competing endogenous RNAs network, protein-protein interactions, genomic changes, gene set enrichment analysis (GSEA), the correlation of AQP1 expression with survival outcomes, drug sensitivity, drug molecular docking, tumor purity and immunity. AQP1 shRNA expressing 786-O cells were established. Cell proliferation was assessed by Cell Counting Kit-8 and colony formation. Transwell migration, invasion, and cell scratch assays were conducted. In our study, AQP1 expression was an independent protective factor for OS and PFS in renal cancer patients. AQP1 expression significantly correlated with survival outcomes in renal cancers, LGG, SARC, HNSC and UVM. PI-103 sensitivity was related to AQP1 expression and had potential binding cite with AQP1 protein. Knockdown of AQP1 reduced cell proliferation, migration and invasion. Our study uncovered AQP1 as a biomarker for favorable survival outcomes in renal cancers. Furthermore, the bioinformatic analysis promoted its implication in pan-cancer scope.

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来源期刊
Human Genomics
Human Genomics GENETICS & HEREDITY-
CiteScore
6.00
自引率
2.20%
发文量
55
审稿时长
11 weeks
期刊介绍: Human Genomics is a peer-reviewed, open access, online journal that focuses on the application of genomic analysis in all aspects of human health and disease, as well as genomic analysis of drug efficacy and safety, and comparative genomics. Topics covered by the journal include, but are not limited to: pharmacogenomics, genome-wide association studies, genome-wide sequencing, exome sequencing, next-generation deep-sequencing, functional genomics, epigenomics, translational genomics, expression profiling, proteomics, bioinformatics, animal models, statistical genetics, genetic epidemiology, human population genetics and comparative genomics.
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