{"title":"Exploring Molecular Alterations in Breast Cancer Among Indian Women Using Label-Free Quantitative Serum Proteomics.","authors":"Anil Kumar Tomar, Ayushi Thapliyal, Sandeep R Mathur, Rajinder Parshad, Suhani, Savita Yadav","doi":"10.1155/bri/5584607","DOIUrl":null,"url":null,"abstract":"<p><p>The clinical data indicate that diverse parameters characterize breast cancer patients in India, including age at presentation, risk factors, outcomes, and behavior. Alarming incidence and mortality rates emphasize the crucial need for early screening measures to combat breast cancer-related deaths effectively. Quantitative proteomic approaches prove pivotal in predicting cancer prognosis, analyzing protein expression patterns tied to disease aggressiveness and metastatic potential, and facilitating conversant therapy selection. Thus, this study was envisioned with the goal of identifying protein markers associated with breast cancer in Indian women, which could potentially be developed as diagnostic tools and therapeutic targets in the future. Applying label-free proteomic quantitation method and statistical analysis, several differentially expressed proteins (DEPs) were identified in the serum of breast cancer patients compared to controls, including SBSN, ANG, PCOLCE, and WFDC3 (upregulated), and PFN1, FLNA, and DSG2 (downregulated). The expression of SBSN was also validated by western blotting. Statistical methods were employed to proteomic expression data, which highlighted the ability of DEPs to distinguish between breast cancer and control samples. Conclusively, this study recognizes prospective biomarkers for breast cancer among Indian women and highlights the requisite of in-depth functional studies to elucidate their precise roles in breast cancer development. We particularly emphasize on SBSN and PFN1, as these proteins were observed to be progressively overexpressed and under expressed, respectively, in breast cancer samples compared to control samples, ranging from early-stage to metastatic cases.</p>","PeriodicalId":8826,"journal":{"name":"Biochemistry Research International","volume":"2024 ","pages":"5584607"},"PeriodicalIF":3.4000,"publicationDate":"2024-11-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11847613/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemistry Research International","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1155/bri/5584607","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
摘要
临床数据表明,印度乳腺癌患者的特征参数多种多样,包括发病年龄、风险因素、结果和行为。令人担忧的发病率和死亡率强调了采取早期筛查措施以有效防止乳腺癌相关死亡的极端必要性。定量蛋白质组学方法在预测癌症预后、分析与疾病侵袭性和转移潜能相关的蛋白质表达模式以及促进治疗选择方面至关重要。因此,本研究的目标是确定与印度妇女乳腺癌相关的蛋白质标记物,这些标记物将来有可能被开发为诊断工具和治疗目标。应用无标记蛋白质组定量方法和统计分析,发现了乳腺癌患者血清中与对照组相比有差异表达的几种蛋白质(DEPs),包括SBSN、ANG、PCOLCE和WFDC3(上调),以及PFN1、FLNA和DSG2(下调)。SBSN 的表达也通过 Western 印迹进行了验证。对蛋白质组表达数据采用了统计方法,这突显了 DEPs 区分乳腺癌和对照样本的能力。总之,这项研究发现了印度妇女乳腺癌的前瞻性生物标志物,并强调了深入功能研究的必要性,以阐明它们在乳腺癌发展中的确切作用。我们特别强调了 SBSN 和 PFN1,因为与对照样本相比,这些蛋白在乳腺癌样本(从早期到转移性病例)中分别被观察到逐渐表达过高和表达过低。
Exploring Molecular Alterations in Breast Cancer Among Indian Women Using Label-Free Quantitative Serum Proteomics.
The clinical data indicate that diverse parameters characterize breast cancer patients in India, including age at presentation, risk factors, outcomes, and behavior. Alarming incidence and mortality rates emphasize the crucial need for early screening measures to combat breast cancer-related deaths effectively. Quantitative proteomic approaches prove pivotal in predicting cancer prognosis, analyzing protein expression patterns tied to disease aggressiveness and metastatic potential, and facilitating conversant therapy selection. Thus, this study was envisioned with the goal of identifying protein markers associated with breast cancer in Indian women, which could potentially be developed as diagnostic tools and therapeutic targets in the future. Applying label-free proteomic quantitation method and statistical analysis, several differentially expressed proteins (DEPs) were identified in the serum of breast cancer patients compared to controls, including SBSN, ANG, PCOLCE, and WFDC3 (upregulated), and PFN1, FLNA, and DSG2 (downregulated). The expression of SBSN was also validated by western blotting. Statistical methods were employed to proteomic expression data, which highlighted the ability of DEPs to distinguish between breast cancer and control samples. Conclusively, this study recognizes prospective biomarkers for breast cancer among Indian women and highlights the requisite of in-depth functional studies to elucidate their precise roles in breast cancer development. We particularly emphasize on SBSN and PFN1, as these proteins were observed to be progressively overexpressed and under expressed, respectively, in breast cancer samples compared to control samples, ranging from early-stage to metastatic cases.