菜豆(Phaseolus vulgaris L.)三螺旋基因家族全基因组鉴定及表达分析在盐和干旱胁迫下

IF 3.7 2区 农林科学 Q1 AGRONOMY
Wenjing Zhang, Yan Cheng, Lingmin Jian, Hongda Wang, Haoxin Li, Zihao Shen, Wenyu Ying, Zhengong Yin, Qi Zhang, Jidao Du
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引用次数: 0

摘要

三螺旋转录因子(Triple-helix transcription factors, GT)在植物的非生物胁迫响应和生长发育中起着至关重要的作用。它们因与GT因子的特异性结合亲和力而得名,可分为5个亚群:GT-1、GT-2、GT-γ、SIP1和SH4。通过参考基因组分析,共鉴定出43个普通菜豆(Phaseolus vulgaris) GT家族成员。PvGT成员表现出不均匀的基因组分布,同一亚群中的成员具有相似的基因结构和基序。顺式作用元件分析表明PvGTs参与激素信号传导和非生物应激调节。共线性分析显示有4对同源PvGTs。为了研究它们的表达模式,我们选择了9个高表达的pvgt进行实时荧光定量PCR (qRT-PCR)分析。其中PvGT02、PvGT28、PvGT30和PvGT34在盐胁迫和干旱胁迫下表达量显著上调。功能鉴定表明,PvGT02显著增强了酵母对盐和干旱胁迫的耐受性。这些发现共同有助于我们对普通豆类PvGT家族进化的理解,为进一步探索提供基础。此外,PvGT02作为耐盐和耐旱育种的潜在候选基因。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genome-Wide Identification and Expression Analysis of the Trihelix Gene Family in Common Bean (Phaseolus vulgaris L.) Under Salt and Drought Stress

Triple-helix transcription factors (GT factors) play a pivotal role in plant abiotic stress responses and growth and development. Named for their specific binding affinity to GT factors, they are clustered into five subgroups: GT-1, GT-2, GT-γ, SIP1 and SH4. In Phaseolus vulgaris, 43 GT family members have been identified through reference genome analysis. PvGT members exhibit uneven genomic distribution, and members within the same subgroup share similar gene structures and motifs. Cis-acting element analysis indicates the involvement of PvGTs in hormonal signalling and abiotic stress regulation. Collinearity analysis revealed four pairs of homologous PvGTs. To investigate their expression patterns, nine PvGTs with high expression levels were selected for quantitative real-time PCR (qRT-PCR) analysis. Among these, PvGT02, PvGT28, PvGT30 and PvGT34 were significantly upregulated under salt and drought stress. Functional characterisation demonstrated that PvGT02 significantly enhanced yeast tolerance to salt and drought stresses. These findings collectively contribute to our understanding of the PvGT family evolution in common bean, providing a foundation for further exploration. Additionally, PvGT02 emerges as a potential candidate gene for breeding salt and drought tolerance.

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来源期刊
Journal of Agronomy and Crop Science
Journal of Agronomy and Crop Science 农林科学-农艺学
CiteScore
8.20
自引率
5.70%
发文量
54
审稿时长
7.8 months
期刊介绍: The effects of stress on crop production of agricultural cultivated plants will grow to paramount importance in the 21st century, and the Journal of Agronomy and Crop Science aims to assist in understanding these challenges. In this context, stress refers to extreme conditions under which crops and forages grow. The journal publishes original papers and reviews on the general and special science of abiotic plant stress. Specific topics include: drought, including water-use efficiency, such as salinity, alkaline and acidic stress, extreme temperatures since heat, cold and chilling stress limit the cultivation of crops, flooding and oxidative stress, and means of restricting them. Special attention is on research which have the topic of narrowing the yield gap. The Journal will give preference to field research and studies on plant stress highlighting these subsections. Particular regard is given to application-oriented basic research and applied research. The application of the scientific principles of agricultural crop experimentation is an essential prerequisite for the publication. Studies based on field experiments must show that they have been repeated (at least three times) on the same organism or have been conducted on several different varieties.
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