Avinash Agarwal, Filipe de Jesus Colwell, Viviana Andrea Correa Galvis, Tom R Hill, Neil Boonham, Ankush Prashar
{"title":"两倍红过量（TREx）：一种简单而新颖的数字颜色指数，可对绿叶和富含花青素的作物进行无创实时监测。","authors":"Avinash Agarwal, Filipe de Jesus Colwell, Viviana Andrea Correa Galvis, Tom R Hill, Neil Boonham, Ankush Prashar","doi":"10.1186/s13007-025-01339-y","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Digital color indices provide a reliable means for assessing plant status by enabling real-time estimation of chlorophyll (Chl) content, and are thus adopted widely for crop monitoring. However, as all prevalent leaf color indices used for this purpose have been developed using green-leaved plants, they do not perform reliably for anthocyanin (Anth)-rich red-leaved varieties. Hence, the present study investigates digital color indices for six types of leafy vegetables with different levels of Anth to identify congruent trends that could be implemented universally for non-invasive crop monitoring irrespective of species and leaf Anth content. For this, datasets from three digital color spaces, viz., RGB (Red, Green, Blue), HSV (Hue, Saturation, Value), and L*a*b* (Lightness, Redness-greenness, Yellowness-blueness), as well as various derived plant color indices were compared with Anth/Chl ratio and SPAD Chl meter readings of n = 320 leaf samples.</p><p><strong>Results: </strong>Logarithmic decline of G/R, G-minus-R, and Augmented Green-Red Index (AGRI) with increasing Anth/Chl ratio (R<sup>2</sup> > 0.8) revealed that relative Anth content affected digital color profile markedly by shifting the greenness-redness balance until the Anth/Chl ratio reached a certain threshold. Further, while most digital color features and indices presented abrupt shifts between Anth-rich and green-leaved samples, the proposed color index Two-fold Red Excess (TREx) did not exhibit any deviation due to leaf Anth content and showed better correlation with SPAD readings (R<sup>2</sup> = 0.855) than all other color features and vegetation indices.</p><p><strong>Conclusion: </strong>The present study provides the first in-depth assessment of variations in RGB-based digital color indices due to high leaf Anth contents, and uses the data for Anth-rich as well as green-leaved crops belonging to different species to formulate a universal digital color index TREx that can be used as a reliable alternative to handheld Chl meters for rapid high-throughput monitoring of green-leaved as well as red-leaved crops.</p>","PeriodicalId":20100,"journal":{"name":"Plant Methods","volume":"21 1","pages":"24"},"PeriodicalIF":4.7000,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11843946/pdf/","citationCount":"0","resultStr":"{\"title\":\"Two-fold red excess (TREx): a simple and novel digital color index that enables non-invasive real-time monitoring of green-leaved as well as anthocyanin-rich crops.\",\"authors\":\"Avinash Agarwal, Filipe de Jesus Colwell, Viviana Andrea Correa Galvis, Tom R Hill, Neil Boonham, Ankush Prashar\",\"doi\":\"10.1186/s13007-025-01339-y\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Digital color indices provide a reliable means for assessing plant status by enabling real-time estimation of chlorophyll (Chl) content, and are thus adopted widely for crop monitoring. However, as all prevalent leaf color indices used for this purpose have been developed using green-leaved plants, they do not perform reliably for anthocyanin (Anth)-rich red-leaved varieties. Hence, the present study investigates digital color indices for six types of leafy vegetables with different levels of Anth to identify congruent trends that could be implemented universally for non-invasive crop monitoring irrespective of species and leaf Anth content. For this, datasets from three digital color spaces, viz., RGB (Red, Green, Blue), HSV (Hue, Saturation, Value), and L*a*b* (Lightness, Redness-greenness, Yellowness-blueness), as well as various derived plant color indices were compared with Anth/Chl ratio and SPAD Chl meter readings of n = 320 leaf samples.</p><p><strong>Results: </strong>Logarithmic decline of G/R, G-minus-R, and Augmented Green-Red Index (AGRI) with increasing Anth/Chl ratio (R<sup>2</sup> > 0.8) revealed that relative Anth content affected digital color profile markedly by shifting the greenness-redness balance until the Anth/Chl ratio reached a certain threshold. Further, while most digital color features and indices presented abrupt shifts between Anth-rich and green-leaved samples, the proposed color index Two-fold Red Excess (TREx) did not exhibit any deviation due to leaf Anth content and showed better correlation with SPAD readings (R<sup>2</sup> = 0.855) than all other color features and vegetation indices.</p><p><strong>Conclusion: </strong>The present study provides the first in-depth assessment of variations in RGB-based digital color indices due to high leaf Anth contents, and uses the data for Anth-rich as well as green-leaved crops belonging to different species to formulate a universal digital color index TREx that can be used as a reliable alternative to handheld Chl meters for rapid high-throughput monitoring of green-leaved as well as red-leaved crops.</p>\",\"PeriodicalId\":20100,\"journal\":{\"name\":\"Plant Methods\",\"volume\":\"21 1\",\"pages\":\"24\"},\"PeriodicalIF\":4.7000,\"publicationDate\":\"2025-02-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11843946/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Methods\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1186/s13007-025-01339-y\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Methods","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1186/s13007-025-01339-y","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Two-fold red excess (TREx): a simple and novel digital color index that enables non-invasive real-time monitoring of green-leaved as well as anthocyanin-rich crops.
Background: Digital color indices provide a reliable means for assessing plant status by enabling real-time estimation of chlorophyll (Chl) content, and are thus adopted widely for crop monitoring. However, as all prevalent leaf color indices used for this purpose have been developed using green-leaved plants, they do not perform reliably for anthocyanin (Anth)-rich red-leaved varieties. Hence, the present study investigates digital color indices for six types of leafy vegetables with different levels of Anth to identify congruent trends that could be implemented universally for non-invasive crop monitoring irrespective of species and leaf Anth content. For this, datasets from three digital color spaces, viz., RGB (Red, Green, Blue), HSV (Hue, Saturation, Value), and L*a*b* (Lightness, Redness-greenness, Yellowness-blueness), as well as various derived plant color indices were compared with Anth/Chl ratio and SPAD Chl meter readings of n = 320 leaf samples.
Results: Logarithmic decline of G/R, G-minus-R, and Augmented Green-Red Index (AGRI) with increasing Anth/Chl ratio (R2 > 0.8) revealed that relative Anth content affected digital color profile markedly by shifting the greenness-redness balance until the Anth/Chl ratio reached a certain threshold. Further, while most digital color features and indices presented abrupt shifts between Anth-rich and green-leaved samples, the proposed color index Two-fold Red Excess (TREx) did not exhibit any deviation due to leaf Anth content and showed better correlation with SPAD readings (R2 = 0.855) than all other color features and vegetation indices.
Conclusion: The present study provides the first in-depth assessment of variations in RGB-based digital color indices due to high leaf Anth contents, and uses the data for Anth-rich as well as green-leaved crops belonging to different species to formulate a universal digital color index TREx that can be used as a reliable alternative to handheld Chl meters for rapid high-throughput monitoring of green-leaved as well as red-leaved crops.
期刊介绍：
Plant Methods is an open access, peer-reviewed, online journal for the plant research community that encompasses all aspects of technological innovation in the plant sciences.
There is no doubt that we have entered an exciting new era in plant biology. The completion of the Arabidopsis genome sequence, and the rapid progress being made in other plant genomics projects are providing unparalleled opportunities for progress in all areas of plant science. Nevertheless, enormous challenges lie ahead if we are to understand the function of every gene in the genome, and how the individual parts work together to make the whole organism. Achieving these goals will require an unprecedented collaborative effort, combining high-throughput, system-wide technologies with more focused approaches that integrate traditional disciplines such as cell biology, biochemistry and molecular genetics.
Technological innovation is probably the most important catalyst for progress in any scientific discipline. Plant Methods’ goal is to stimulate the development and adoption of new and improved techniques and research tools and, where appropriate, to promote consistency of methodologies for better integration of data from different laboratories.
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