Justin N Kim, Yingnan Song, Hao Wu, Ananya Subramaniam, Jihye Lee, Mohamed H E Makhlouf, Neda S Hassani, Sadeer Al-Kindi, David L Wilson, Juhwan Lee
{"title":"通过自我监督学习和自动冠状动脉周围脂肪组织分割改进冠状动脉分割:冠状动脉计算机断层血管造影图像的多机构研究。","authors":"Justin N Kim, Yingnan Song, Hao Wu, Ananya Subramaniam, Jihye Lee, Mohamed H E Makhlouf, Neda S Hassani, Sadeer Al-Kindi, David L Wilson, Juhwan Lee","doi":"10.1117/1.JMI.12.1.016002","DOIUrl":null,"url":null,"abstract":"<p><strong>Purpose: </strong>Coronary artery disease (CAD) is a leading cause of morbidity and mortality worldwide, with coronary computed tomography angiography (CCTA) playing a crucial role in its diagnosis. The mean Hounsfield unit (HU) of pericoronary adipose tissue (PCAT) is linked to cardiovascular risk. We utilized a self-supervised learning framework (SSL) to improve the accuracy and generalizability of coronary artery segmentation on CCTA volumes while addressing the limitations of small-annotated datasets.</p><p><strong>Approach: </strong>We utilized self-supervised pretraining followed by supervised fine-tuning to segment coronary arteries. To evaluate the data efficiency of SSL, we varied the number of CCTA volumes used during pretraining. In addition, we developed an automated PCAT segmentation algorithm utilizing centerline extraction, spatial-geometric coronary identification, and landmark detection. We evaluated our method on a multi-institutional dataset by assessing coronary artery and PCAT segmentation accuracy via Dice scores and comparing mean PCAT HU values with the ground truth.</p><p><strong>Results: </strong>Our approach significantly improved coronary artery segmentation, achieving Dice scores up to 0.787 after self-supervised pretraining. The automated PCAT segmentation achieved near-perfect performance, with <math><mrow><mi>R</mi></mrow> </math> -squared values of 0.9998 for both the left anterior descending artery and the right coronary artery indicating excellent agreement between predicted and actual mean PCAT HU values. Self-supervised pretraining notably enhanced model generalizability on external datasets, improving overall segmentation accuracy.</p><p><strong>Conclusions: </strong>We demonstrate the potential of SSL to advance CCTA image analysis, enabling more accurate CAD diagnostics. Our findings highlight the robustness of SSL for automated coronary artery and PCAT segmentation, offering promising advancements in cardiovascular care.</p>","PeriodicalId":47707,"journal":{"name":"Journal of Medical Imaging","volume":"12 1","pages":"016002"},"PeriodicalIF":1.9000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11831809/pdf/","citationCount":"0","resultStr":"{\"title\":\"Improving coronary artery segmentation with self-supervised learning and automated pericoronary adipose tissue segmentation: a multi-institutional study on coronary computed tomography angiography images.\",\"authors\":\"Justin N Kim, Yingnan Song, Hao Wu, Ananya Subramaniam, Jihye Lee, Mohamed H E Makhlouf, Neda S Hassani, Sadeer Al-Kindi, David L Wilson, Juhwan Lee\",\"doi\":\"10.1117/1.JMI.12.1.016002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Purpose: </strong>Coronary artery disease (CAD) is a leading cause of morbidity and mortality worldwide, with coronary computed tomography angiography (CCTA) playing a crucial role in its diagnosis. The mean Hounsfield unit (HU) of pericoronary adipose tissue (PCAT) is linked to cardiovascular risk. We utilized a self-supervised learning framework (SSL) to improve the accuracy and generalizability of coronary artery segmentation on CCTA volumes while addressing the limitations of small-annotated datasets.</p><p><strong>Approach: </strong>We utilized self-supervised pretraining followed by supervised fine-tuning to segment coronary arteries. To evaluate the data efficiency of SSL, we varied the number of CCTA volumes used during pretraining. In addition, we developed an automated PCAT segmentation algorithm utilizing centerline extraction, spatial-geometric coronary identification, and landmark detection. We evaluated our method on a multi-institutional dataset by assessing coronary artery and PCAT segmentation accuracy via Dice scores and comparing mean PCAT HU values with the ground truth.</p><p><strong>Results: </strong>Our approach significantly improved coronary artery segmentation, achieving Dice scores up to 0.787 after self-supervised pretraining. The automated PCAT segmentation achieved near-perfect performance, with <math><mrow><mi>R</mi></mrow> </math> -squared values of 0.9998 for both the left anterior descending artery and the right coronary artery indicating excellent agreement between predicted and actual mean PCAT HU values. Self-supervised pretraining notably enhanced model generalizability on external datasets, improving overall segmentation accuracy.</p><p><strong>Conclusions: </strong>We demonstrate the potential of SSL to advance CCTA image analysis, enabling more accurate CAD diagnostics. Our findings highlight the robustness of SSL for automated coronary artery and PCAT segmentation, offering promising advancements in cardiovascular care.</p>\",\"PeriodicalId\":47707,\"journal\":{\"name\":\"Journal of Medical Imaging\",\"volume\":\"12 1\",\"pages\":\"016002\"},\"PeriodicalIF\":1.9000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11831809/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Medical Imaging\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1117/1.JMI.12.1.016002\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/2/17 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Medical Imaging","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1117/1.JMI.12.1.016002","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/2/17 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
Improving coronary artery segmentation with self-supervised learning and automated pericoronary adipose tissue segmentation: a multi-institutional study on coronary computed tomography angiography images.
Purpose: Coronary artery disease (CAD) is a leading cause of morbidity and mortality worldwide, with coronary computed tomography angiography (CCTA) playing a crucial role in its diagnosis. The mean Hounsfield unit (HU) of pericoronary adipose tissue (PCAT) is linked to cardiovascular risk. We utilized a self-supervised learning framework (SSL) to improve the accuracy and generalizability of coronary artery segmentation on CCTA volumes while addressing the limitations of small-annotated datasets.
Approach: We utilized self-supervised pretraining followed by supervised fine-tuning to segment coronary arteries. To evaluate the data efficiency of SSL, we varied the number of CCTA volumes used during pretraining. In addition, we developed an automated PCAT segmentation algorithm utilizing centerline extraction, spatial-geometric coronary identification, and landmark detection. We evaluated our method on a multi-institutional dataset by assessing coronary artery and PCAT segmentation accuracy via Dice scores and comparing mean PCAT HU values with the ground truth.
Results: Our approach significantly improved coronary artery segmentation, achieving Dice scores up to 0.787 after self-supervised pretraining. The automated PCAT segmentation achieved near-perfect performance, with -squared values of 0.9998 for both the left anterior descending artery and the right coronary artery indicating excellent agreement between predicted and actual mean PCAT HU values. Self-supervised pretraining notably enhanced model generalizability on external datasets, improving overall segmentation accuracy.
Conclusions: We demonstrate the potential of SSL to advance CCTA image analysis, enabling more accurate CAD diagnostics. Our findings highlight the robustness of SSL for automated coronary artery and PCAT segmentation, offering promising advancements in cardiovascular care.
期刊介绍:
JMI covers fundamental and translational research, as well as applications, focused on medical imaging, which continue to yield physical and biomedical advancements in the early detection, diagnostics, and therapy of disease as well as in the understanding of normal. The scope of JMI includes: Imaging physics, Tomographic reconstruction algorithms (such as those in CT and MRI), Image processing and deep learning, Computer-aided diagnosis and quantitative image analysis, Visualization and modeling, Picture archiving and communications systems (PACS), Image perception and observer performance, Technology assessment, Ultrasonic imaging, Image-guided procedures, Digital pathology, Biomedical applications of biomedical imaging. JMI allows for the peer-reviewed communication and archiving of scientific developments, translational and clinical applications, reviews, and recommendations for the field.