糖组学实验(MIRAGE)项目所需的最小信息:提高凝集素微阵列数据报告标准。

IF 3.3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Hiroaki Tateno, Lara K Mahal, Ten Feizi, Carsten Kettner, James C Paulson
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引用次数: 0

摘要

海市蜃楼(糖组学实验所需的最小信息)项目由糖生物学、糖分析学和糖信息学专家在贝尔斯坦研究所的主持下建立。该工作组旨在为科学文献中聚糖结构和功能研究中进行的各种实验和分析结果的报告制定指南。先前的糖糖分析指南已经建立,包括质谱和糖聚糖微阵列。凝集素微阵列在世界范围内被用于各种生物样品的聚糖分析,但关于样品制备和荧光标记等实验方法的信息报道往往不足。在这里,我们提出了专门设计的指南,以提高凝集素微阵列分析报告数据的标准。对于凝集素微阵列实验工作流程中的七个领域中的每一个,我们提供了报告结果时应包含的最小信息的建议。当幻影凝集素微阵列指南被科学界采用时,预计将加强数据解释,促进实验室之间的数据比较,并鼓励将凝集素微阵列数据存入国际数据库。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting lectin microarray data.

The MIRAGE (Minimum Information Required for a Glycomics Experiment) project has been established by experts in glycobiology, glycoanalytics, and glycoinformatics under the auspieces of the Beilstein-Institut. The working group aims to develop guidelines for reporting results from various experiments and analyses conducted in structural and functional studies of glycans in the scientific literature. Previous guidelines have been established for glycomic analytics, including mass spectrometry and glycan microarrays. Lectin microarrays are used worldwide for glycan profiling of various biological samples, but there are often insufficient reports on information about experimental methods such as sample preparation and fluorescence labeling. Here, we propose guidelines specifically designed to improve the standards for reporting data from lectin microarray analyses. For each of the seven areas in the workflow of a lectin microarray experiment, we provide recommendations for the minimum information that should be included when reporting results. When adopted by the scientific community the MIRAGE lectin microarray guidelines are expected to enhance data interpretation, facilitate comparison of data between laboratories and encourage the deposition of lectin microarray data in international databases.

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来源期刊
Glycobiology
Glycobiology 生物-生化与分子生物学
CiteScore
7.50
自引率
4.70%
发文量
73
审稿时长
3 months
期刊介绍: Established as the leading journal in the field, Glycobiology provides a unique forum dedicated to research into the biological functions of glycans, including glycoproteins, glycolipids, proteoglycans and free oligosaccharides, and on proteins that specifically interact with glycans (including lectins, glycosyltransferases, and glycosidases). Glycobiology is essential reading for researchers in biomedicine, basic science, and the biotechnology industries. By providing a single forum, the journal aims to improve communication between glycobiologists working in different disciplines and to increase the overall visibility of the field.
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