基于机器学习的z谱CEST、rNOE和MTC多池Voigt拟合

IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Sajad Mohammed Ali, Peter C. M. van Zijl, Jannik Prasuhn, Ronnie Wirestam, Linda Knutsson, Nirbhay N. Yadav
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引用次数: 0

摘要

目的:开发基于四池Voigt (FPV)机器学习(ML)的z谱拟合,以减少扫描仪上分析的临床可行性拟合时间,并促进更大规模的队列研究。将该方法与基于四池洛伦兹(FPL) ml的建模方法进行了比较,以经验验证Voigt模型在z谱分析中的优势。方法:将Voigt和Lorentzian模型应用最小二乘法拟合人体3t z谱数据,生成相应ML版本的训练数据。训练梯度增强决策树,得到一个Voigt模型和一个Lorentzian ML模型。测试了模型的精度,并对ML模型和LS模型的拟合次数进行了评估。比较了Voigt模型和Lorentzian模型的拟合优度。结果:每个ML模型(Voigt和Lorentzian)的训练时间均小于1 min,与相应的LS版本相比,LS版本获得的参数与相应的ML版本差异不显著,建模精度很好。两种ML模型的平均拟合时间为20 μs/谱,而结合FPL和FPV的LS模型的平均拟合时间分别为0.27和0.82 μs/谱。结论:与传统的LS方法相比,梯度增强决策树多池z谱拟合显著减少了拟合时间,在保证拟合质量的同时实现了快速数据处理。随着训练时间短,这使得该方法适合临床设置和大型队列研究应用。与FPL-ML方法相比,FPV-ML方法的拟合优度有显著提高。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Machine learning-based multi-pool Voigt fitting of CEST, rNOE, and MTC in Z-spectra

Purpose

Four-pool Voigt (FPV) machine learning (ML)–based fitting for Z-spectra was developed to reduce fitting times for clinical feasibility in terms of on-scanner analysis and to promote larger cohort studies. The approach was compared to four-pool Lorentzian (FPL)-ML–based modeling to empirically verify the advantage of Voigt models for Z-spectra.

Methods

Voigt and Lorentzian models were fitted to human 3 T Z-spectral data using least squares (LS) to generate training data for the corresponding ML versions. Gradient boosting decision trees were trained, resulting in one Voigt and one Lorentzian ML model. Modeling accuracy was tested, and the fitting times of the ML models and LS versions were evaluated. The goodness of fits of Voigt and Lorentzian ML models were compared.

Results

The training time for each ML model (Voigt and Lorentzian) was less than 1 min, and the modeling accuracy compared to the corresponding LS versions was excellent, as indicated by a nonsignificant difference between the parameters obtained by LS and corresponding ML versions. The average fitting time was 20 μs/spectrum for both ML models compared to 0.27 and 0.82 s/spectrum for LS with FPL and FPV, respectively. The goodness of fits of FPV-ML and FPL-ML differed significantly (p < 0.005), with FPV-ML showing an improvement for all tested data.

Conclusion

Gradient boosting decision trees fitting of multi-pool Z-spectra significantly reduces fitting times compared to traditional LS approaches, allowing fast data processing while upholding fitting quality. Along with the short training times, this makes the method suitable for clinical settings and for large cohort research applications. The FPV-ML approach provides a significant improvement of goodness of fit compared to FPL-ML.

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来源期刊
CiteScore
6.70
自引率
24.20%
发文量
376
审稿时长
2-4 weeks
期刊介绍: Magnetic Resonance in Medicine (Magn Reson Med) is an international journal devoted to the publication of original investigations concerned with all aspects of the development and use of nuclear magnetic resonance and electron paramagnetic resonance techniques for medical applications. Reports of original investigations in the areas of mathematics, computing, engineering, physics, biophysics, chemistry, biochemistry, and physiology directly relevant to magnetic resonance will be accepted, as well as methodology-oriented clinical studies.
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