Shachar Shani, Mali Gana-Weisz, Anat Bar-Shira, Avner Thaler, Tanya Gurevich, Anat Mirelman, Nir Giladi, Roy N Alcalay, Avi Orr-Urtreger, Orly Goldstein
{"title":"P2RX7是一种适应性免疫反应基因,与帕金森病的风险和发病年龄有关。","authors":"Shachar Shani, Mali Gana-Weisz, Anat Bar-Shira, Avner Thaler, Tanya Gurevich, Anat Mirelman, Nir Giladi, Roy N Alcalay, Avi Orr-Urtreger, Orly Goldstein","doi":"10.1177/1877718X241296015","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>The adaptive immune response has a role in Parkinson's disease (PD). Patients with <i>LRRK2</i> or <i>GBA1</i> mutations often exhibit distinct clinical characteristics.</p><p><strong>Objective: </strong>To evaluate the involvement of adaptive immune response genes in three PD groups: <i>GBA1</i>-PD, <i>LRRK2</i>-PD, and non-carrier (NC)-PD.</p><p><strong>Methods: </strong>Differentially expressed genes (DEGs) associated with PD were identified using four datasets. Of them, adaptive immune response genes were evaluated using whole-genome-sequencing of 201 unrelated Ashkenazi-Jewish (AJ) PD patients. Potential pathogenic variants were identified, and <i>P2RX7</i> variants were assessed in 1200 AJ-PD patients. Burden analysis of rare variants (allele frequencies (AF) < 0.01) on disease risk, and association analyses of common variants (AF ≥ 0.01) with disease risk and age-at-onset (AAO) were conducted. AFs were compared to AJ-non-neuro cases reported in gnomAD. Variants associated with PD were further examined in an independent AJ cohort from AMP-PD.</p><p><strong>Results: </strong>Of the four adaptive immune DEGs identified, <i>CD8B2, P2RX7</i>, <i>IL27RA</i>, and <i>ZC3H12A</i>, three common variants in <i>P2RX7</i> were statistically significant: Tyr155His was associated with NC-PD (allelic OR = 1.15, <i>p </i>= 0.015) ; Arg276His was associated with <i>LRRK2</i>-PD (allelic OR = 2.10, <i>p </i>= 0.037), while Glu496Ala was associated with earlier AAO in <i>LRRK2</i>-PD (<i>p </i>= 0.014). Burden analysis showed no significant effect on PD-risk. In the AMP-PD cohort, odds ratios of the two risk variants were similar to the primary cohort, but did not reach significance, probably due to small control sample size (n = 263).</p><p><strong>Conclusions: </strong>Common variants within <i>P2RX7</i> are likely associated with PD-risk and earlier AAO. These findings further suggest <i>P2RX7</i>'s involvement in PD and its potential interplay with <i>LRRK2</i>.</p>","PeriodicalId":16660,"journal":{"name":"Journal of Parkinson's disease","volume":"14 8","pages":"1575-1583"},"PeriodicalIF":4.0000,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>P2RX7,</i> an adaptive immune response gene, is associated with Parkinson's disease risk and age at onset.\",\"authors\":\"Shachar Shani, Mali Gana-Weisz, Anat Bar-Shira, Avner Thaler, Tanya Gurevich, Anat Mirelman, Nir Giladi, Roy N Alcalay, Avi Orr-Urtreger, Orly Goldstein\",\"doi\":\"10.1177/1877718X241296015\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>The adaptive immune response has a role in Parkinson's disease (PD). Patients with <i>LRRK2</i> or <i>GBA1</i> mutations often exhibit distinct clinical characteristics.</p><p><strong>Objective: </strong>To evaluate the involvement of adaptive immune response genes in three PD groups: <i>GBA1</i>-PD, <i>LRRK2</i>-PD, and non-carrier (NC)-PD.</p><p><strong>Methods: </strong>Differentially expressed genes (DEGs) associated with PD were identified using four datasets. Of them, adaptive immune response genes were evaluated using whole-genome-sequencing of 201 unrelated Ashkenazi-Jewish (AJ) PD patients. Potential pathogenic variants were identified, and <i>P2RX7</i> variants were assessed in 1200 AJ-PD patients. Burden analysis of rare variants (allele frequencies (AF) < 0.01) on disease risk, and association analyses of common variants (AF ≥ 0.01) with disease risk and age-at-onset (AAO) were conducted. AFs were compared to AJ-non-neuro cases reported in gnomAD. Variants associated with PD were further examined in an independent AJ cohort from AMP-PD.</p><p><strong>Results: </strong>Of the four adaptive immune DEGs identified, <i>CD8B2, P2RX7</i>, <i>IL27RA</i>, and <i>ZC3H12A</i>, three common variants in <i>P2RX7</i> were statistically significant: Tyr155His was associated with NC-PD (allelic OR = 1.15, <i>p </i>= 0.015) ; Arg276His was associated with <i>LRRK2</i>-PD (allelic OR = 2.10, <i>p </i>= 0.037), while Glu496Ala was associated with earlier AAO in <i>LRRK2</i>-PD (<i>p </i>= 0.014). Burden analysis showed no significant effect on PD-risk. In the AMP-PD cohort, odds ratios of the two risk variants were similar to the primary cohort, but did not reach significance, probably due to small control sample size (n = 263).</p><p><strong>Conclusions: </strong>Common variants within <i>P2RX7</i> are likely associated with PD-risk and earlier AAO. These findings further suggest <i>P2RX7</i>'s involvement in PD and its potential interplay with <i>LRRK2</i>.</p>\",\"PeriodicalId\":16660,\"journal\":{\"name\":\"Journal of Parkinson's disease\",\"volume\":\"14 8\",\"pages\":\"1575-1583\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2024-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Parkinson's disease\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1177/1877718X241296015\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/12/1 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"NEUROSCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Parkinson's disease","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1177/1877718X241296015","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/12/1 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"NEUROSCIENCES","Score":null,"Total":0}
P2RX7, an adaptive immune response gene, is associated with Parkinson's disease risk and age at onset.
Background: The adaptive immune response has a role in Parkinson's disease (PD). Patients with LRRK2 or GBA1 mutations often exhibit distinct clinical characteristics.
Objective: To evaluate the involvement of adaptive immune response genes in three PD groups: GBA1-PD, LRRK2-PD, and non-carrier (NC)-PD.
Methods: Differentially expressed genes (DEGs) associated with PD were identified using four datasets. Of them, adaptive immune response genes were evaluated using whole-genome-sequencing of 201 unrelated Ashkenazi-Jewish (AJ) PD patients. Potential pathogenic variants were identified, and P2RX7 variants were assessed in 1200 AJ-PD patients. Burden analysis of rare variants (allele frequencies (AF) < 0.01) on disease risk, and association analyses of common variants (AF ≥ 0.01) with disease risk and age-at-onset (AAO) were conducted. AFs were compared to AJ-non-neuro cases reported in gnomAD. Variants associated with PD were further examined in an independent AJ cohort from AMP-PD.
Results: Of the four adaptive immune DEGs identified, CD8B2, P2RX7, IL27RA, and ZC3H12A, three common variants in P2RX7 were statistically significant: Tyr155His was associated with NC-PD (allelic OR = 1.15, p = 0.015) ; Arg276His was associated with LRRK2-PD (allelic OR = 2.10, p = 0.037), while Glu496Ala was associated with earlier AAO in LRRK2-PD (p = 0.014). Burden analysis showed no significant effect on PD-risk. In the AMP-PD cohort, odds ratios of the two risk variants were similar to the primary cohort, but did not reach significance, probably due to small control sample size (n = 263).
Conclusions: Common variants within P2RX7 are likely associated with PD-risk and earlier AAO. These findings further suggest P2RX7's involvement in PD and its potential interplay with LRRK2.
期刊介绍:
The Journal of Parkinson''s Disease (JPD) publishes original research in basic science, translational research and clinical medicine in Parkinson’s disease in cooperation with the Journal of Alzheimer''s Disease. It features a first class Editorial Board and provides rigorous peer review and rapid online publication.