光声计算机断层扫描的超快滤波反投影。

IF 2.9 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS
Biomedical optics express Pub Date : 2025-01-02 eCollection Date: 2025-02-01 DOI:10.1364/BOE.540622
Songde Liu, Zhijian Tan, Pengfei Shao, Sheng Wang, Chao Tian
{"title":"光声计算机断层扫描的超快滤波反投影。","authors":"Songde Liu, Zhijian Tan, Pengfei Shao, Sheng Wang, Chao Tian","doi":"10.1364/BOE.540622","DOIUrl":null,"url":null,"abstract":"<p><p>The filtered back-projection (FBP) algorithm is widely used in photoacoustic computed tomography (PACT) for image reconstruction due to its simplicity and efficiency. Yet, the real-time processing of high-speed PACT data remains challenging for regular FBP implementations. To enhance the reconstruction efficiency of the FBP algorithm, researchers have developed FBP implementations based on the graphics processing units (GPUs). However, existing GPU-accelerated FBP algorithms either sacrifice accuracy for efficiency or are still inefficient for high-speed, real-time PACT imaging. Herein, we report an ultrafast GPU acceleration-based FBP implementation for PACT image reconstruction without sacrificing accuracy. Firstly, the computation complexity of the filtering part of the FBP algorithm is significantly simplified with a pre-computed filtering matrix to enhance filtering efficiency. Secondly, the computation efficiency of the back-projection part of the FBP algorithm is dramatically increased through parallel programming and GPU acceleration. As a result, the proposed FBP implementation takes only 0.38 ms to reconstruct a two-dimensional image of 512 × 512 pixels, which is 439 times faster than regular FBP implementations. Numerical and experimental results show that the proposed FBP implementation outperforms existing GPU-based FBP implementations in reconstruction accuracy and computation efficiency. To the best of our knowledge, this is the fastest implementation of the FBP algorithm ever reported in PACT. This work is expected to provide an ultrafast and accurate image reconstruction solution for high-speed, real-time PACT imaging.</p>","PeriodicalId":8969,"journal":{"name":"Biomedical optics express","volume":"16 2","pages":"362-381"},"PeriodicalIF":2.9000,"publicationDate":"2025-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11828441/pdf/","citationCount":"0","resultStr":"{\"title\":\"Ultrafast filtered back-projection for photoacoustic computed tomography.\",\"authors\":\"Songde Liu, Zhijian Tan, Pengfei Shao, Sheng Wang, Chao Tian\",\"doi\":\"10.1364/BOE.540622\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The filtered back-projection (FBP) algorithm is widely used in photoacoustic computed tomography (PACT) for image reconstruction due to its simplicity and efficiency. Yet, the real-time processing of high-speed PACT data remains challenging for regular FBP implementations. To enhance the reconstruction efficiency of the FBP algorithm, researchers have developed FBP implementations based on the graphics processing units (GPUs). However, existing GPU-accelerated FBP algorithms either sacrifice accuracy for efficiency or are still inefficient for high-speed, real-time PACT imaging. Herein, we report an ultrafast GPU acceleration-based FBP implementation for PACT image reconstruction without sacrificing accuracy. Firstly, the computation complexity of the filtering part of the FBP algorithm is significantly simplified with a pre-computed filtering matrix to enhance filtering efficiency. Secondly, the computation efficiency of the back-projection part of the FBP algorithm is dramatically increased through parallel programming and GPU acceleration. As a result, the proposed FBP implementation takes only 0.38 ms to reconstruct a two-dimensional image of 512 × 512 pixels, which is 439 times faster than regular FBP implementations. Numerical and experimental results show that the proposed FBP implementation outperforms existing GPU-based FBP implementations in reconstruction accuracy and computation efficiency. To the best of our knowledge, this is the fastest implementation of the FBP algorithm ever reported in PACT. This work is expected to provide an ultrafast and accurate image reconstruction solution for high-speed, real-time PACT imaging.</p>\",\"PeriodicalId\":8969,\"journal\":{\"name\":\"Biomedical optics express\",\"volume\":\"16 2\",\"pages\":\"362-381\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2025-01-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11828441/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedical optics express\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1364/BOE.540622\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/2/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical optics express","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1364/BOE.540622","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/2/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

摘要

滤波反投影(FBP)算法以其简单、高效的优点被广泛应用于光声计算机断层成像(PACT)中。然而,高速PACT数据的实时处理仍然是常规FBP实施的挑战。为了提高FBP算法的重建效率,研究人员开发了基于图形处理单元(gpu)的FBP实现。然而,现有的gpu加速FBP算法要么为了效率而牺牲精度,要么对于高速、实时的PACT成像仍然效率低下。在此,我们报告了一种基于GPU加速的超快速FBP实现,用于PACT图像重建而不牺牲精度。首先,通过预先计算滤波矩阵,大大简化了FBP算法滤波部分的计算复杂度,提高了滤波效率;其次,通过并行编程和GPU加速,显著提高了FBP算法中反投影部分的计算效率。结果表明,该算法重构512 × 512像素的二维图像只需要0.38 ms,比常规的FBP算法快439倍。数值和实验结果表明,该算法在重构精度和计算效率方面都优于现有的基于gpu的FBP算法。据我们所知,这是PACT中报道的最快的FBP算法实现。这项工作有望为高速、实时PACT成像提供超快速、精确的图像重建解决方案。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Ultrafast filtered back-projection for photoacoustic computed tomography.

The filtered back-projection (FBP) algorithm is widely used in photoacoustic computed tomography (PACT) for image reconstruction due to its simplicity and efficiency. Yet, the real-time processing of high-speed PACT data remains challenging for regular FBP implementations. To enhance the reconstruction efficiency of the FBP algorithm, researchers have developed FBP implementations based on the graphics processing units (GPUs). However, existing GPU-accelerated FBP algorithms either sacrifice accuracy for efficiency or are still inefficient for high-speed, real-time PACT imaging. Herein, we report an ultrafast GPU acceleration-based FBP implementation for PACT image reconstruction without sacrificing accuracy. Firstly, the computation complexity of the filtering part of the FBP algorithm is significantly simplified with a pre-computed filtering matrix to enhance filtering efficiency. Secondly, the computation efficiency of the back-projection part of the FBP algorithm is dramatically increased through parallel programming and GPU acceleration. As a result, the proposed FBP implementation takes only 0.38 ms to reconstruct a two-dimensional image of 512 × 512 pixels, which is 439 times faster than regular FBP implementations. Numerical and experimental results show that the proposed FBP implementation outperforms existing GPU-based FBP implementations in reconstruction accuracy and computation efficiency. To the best of our knowledge, this is the fastest implementation of the FBP algorithm ever reported in PACT. This work is expected to provide an ultrafast and accurate image reconstruction solution for high-speed, real-time PACT imaging.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Biomedical optics express
Biomedical optics express BIOCHEMICAL RESEARCH METHODS-OPTICS
CiteScore
6.80
自引率
11.80%
发文量
633
审稿时长
1 months
期刊介绍: The journal''s scope encompasses fundamental research, technology development, biomedical studies and clinical applications. BOEx focuses on the leading edge topics in the field, including: Tissue optics and spectroscopy Novel microscopies Optical coherence tomography Diffuse and fluorescence tomography Photoacoustic and multimodal imaging Molecular imaging and therapies Nanophotonic biosensing Optical biophysics/photobiology Microfluidic optical devices Vision research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信