台北市污水SARS-CoV-2监测的COVID-19流行曲线建模

IF 5.4 Q2 ENGINEERING, ENVIRONMENTAL
Chung-Yen Chen , Yu-Hsiang Chang , Chi-Hsin Sally Chen , Sui-Yuan Chang , Chang-Chuan Chan , Pau-Chung Chen , Ta-Chen Su
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引用次数: 0

摘要

在2019冠状病毒病大流行期间,70多个国家将废水监测作为发现不明病例和监测流行曲线的新工具。然而,流行病预测模型具有高度的地点特异性,需要有针对性的方法。摘要本研究旨在建立台北市污水监测系统,并建立流行病学预测模型。2022年5 - 8月,在信义区和内湖区每天采集一次废水样本,在其余10个区每周采集两次。采用RT-qPCR对SARS-CoV-2遗传物质进行定量,并计算SARS-CoV-2病毒浓度与人RNase P基因浓度之比作为“相对信号”,以归一化样本采集的变异性。根据两区数据进行回归分析,预测新发病例。废水样品平均每升含有1829.0±2237.7个病毒拷贝,相对信号平均值为17.1±16.7。根据温度调整后的最佳拟合模型表明,病毒信号增加1%对应于未来5天新病例移动平均值增加约0.27%。模型的r平方值为0.78,具有较强的解释力。该模型通过配对样本t检验进行了验证,可靠地估计了其他10个地区的流行趋势,预测病例和报告病例之间没有显著差异。这些研究结果表明,废水病毒监测可以成为台北等城市环境中流行病预测的有效补充工具,这些城市的下水道连接性很高。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Modelling COVID-19 epidemic curve in Taipei City, Taiwan by a citywide wastewater SARS-CoV-2 Surveillance

Modelling COVID-19 epidemic curve in Taipei City, Taiwan by a citywide wastewater SARS-CoV-2 Surveillance
Over 70 countries have adopted wastewater surveillance during the COVID-19 pandemic as a novel tool to detect unidentified cases and monitor epidemic curves. However, epidemic prediction models are highly site-specific, necessitating tailored approaches. This study aimed to establish a citywide wastewater surveillance system and develop an epidemic prediction model for Taipei City, Taiwan. From May to August 2022, wastewater samples were collected daily from the Xinyi and Neihu districts and twice weekly from the remaining 10 districts. SARS-CoV-2 genetic material was quantified using RT-qPCR, and a “relative signal” was calculated as the ratio of SARS-CoV-2 viral concentration to the concentration of the human RNase P gene to normalize variability in sample collection. Regression analysis based on data from the two districts was conducted to forecast new COVID-19 cases. On average, wastewater samples contained 1,829.0 ± 2,237.7 viral copies per liter, with relative signals averaging 17.1 ± 16.7. The best-fitting model, adjusted for temperature, indicated that a 1 % increase in viral signals corresponded to an approximately 0.27 % rise in the future 5-day moving average of new cases. With an R-squared value of 0.78, the model demonstrated robust explanatory power. The model, validated via a paired sample t-test, reliably estimated epidemic trends with no significant difference between predicted and reported cases in the other 10 districts. These findings suggest that wastewater viral surveillance can be an effective supplementary tool for epidemic forecasting in urban settings like Taipei, where high sewer connectivity is in place.
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来源期刊
Journal of hazardous materials advances
Journal of hazardous materials advances Environmental Engineering
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