基于机器学习的肾上腺皮质癌生存预测工具。

IF 5.1 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM
Emre Sedar Saygili, Yasir S Elhassan, Alessandro Prete, Juliane Lippert, Barbara Altieri, Cristina L Ronchi
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引用次数: 0

摘要

背景:肾上腺皮质癌(ACC)是一种罕见的侵袭性恶性肿瘤,临床预后难以预测。S-GRAS评分结合临床和组织病理学变量(肿瘤分期、分级、切除状态、年龄和症状),显示ACC患者预后良好。目的:应用鲁棒机器学习(ML)模型改进ACC预后分类。方法:我们使用已发表的S-GRAS数据集(n=942)作为训练队列,并使用独立数据集(n=152)进行验证,开发ML模型来增强结果预测。基于个体临床变量构建16个ML模型。将表现最好的模型用于开发基于网络的个性化风险预测工具。结果:二次判别分析(Quadratic Discriminant Analysis)、光梯度增强机(Light Gradient Boosting Machine)和AdaBoost Classifier模型在预测5年总死亡率(OM)、1年和3年疾病进展(DP)方面表现最佳,训练组的F1得分分别为0.79、0.63和0.83,验证组的F1得分分别为0.72、0.60和0.83。5年OM的敏感性和特异性在训练队列中分别为77%和77%,在验证队列中分别为65%和81%。开发了一个基于网络的工具(https://acc-survival.streamlit.app),用于易于应用和个性化的死亡率和疾病进展风险预测。结论:即使使用稳健的ML模型方法,S-GRAS参数也能有效预测ACC患者的预后。我们的web应用程序可即时估计ACC患者的死亡率和疾病进展,代表了在临床实践中推动个性化管理决策的可访问工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Machine Learning-Based Survival Prediction Tool for Adrenocortical Carcinoma.

Machine Learning-Based Survival Prediction Tool for Adrenocortical Carcinoma.

Context: Adrenocortical carcinoma (ACC) is a rare, aggressive malignancy with difficult to predict clinical outcomes. The S-GRAS score combines clinical and histopathological variables (tumor stage, grade, resection status, age, and symptoms) and showed good prognostic performance for patients with ACC.

Objective: To improve ACC prognostic classification by applying robust machine learning (ML) models.

Method: We developed ML models to enhance outcome prediction using the published S-GRAS dataset (n = 942) as the training cohort and an independent dataset (n = 152) for validation. Sixteen ML models were constructed based on individual clinical variables. The best-performing models were used to develop a web-based tool for individualized risk prediction.

Results: Quadratic Discriminant Analysis, Light Gradient Boosting Machine, and AdaBoost Classifier models exhibited the highest performance, predicting 5-year overall mortality (OM), and 1-year and 3-year disease progression (DP) with F1 scores of 0.79, 0.63, and 0.83 in the training cohort, and 0.72, 0.60, and 0.83 in the validation cohort. Sensitivity and specificity for 5-year OM were at 77% and 77% in the training cohort, and 65% and 81% in the validation cohort, respectively. A web-based tool (https://acc-survival.streamlit.app) was developed for easily applicable and individualized risk prediction of mortality and disease progression.

Conclusion: S-GRAS parameters can efficiently predict outcome in patients with ACC, even using a robust ML model approach. Our web app instantly estimates the mortality and disease progression for patients with ACC, representing an accessible tool to drive personalized management decisions in clinical practice.

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来源期刊
Journal of Clinical Endocrinology & Metabolism
Journal of Clinical Endocrinology & Metabolism 医学-内分泌学与代谢
CiteScore
11.40
自引率
5.20%
发文量
673
审稿时长
1 months
期刊介绍: The Journal of Clinical Endocrinology & Metabolism is the world"s leading peer-reviewed journal for endocrine clinical research and cutting edge clinical practice reviews. Each issue provides the latest in-depth coverage of new developments enhancing our understanding, diagnosis and treatment of endocrine and metabolic disorders. Regular features of special interest to endocrine consultants include clinical trials, clinical reviews, clinical practice guidelines, case seminars, and controversies in clinical endocrinology, as well as original reports of the most important advances in patient-oriented endocrine and metabolic research. According to the latest Thomson Reuters Journal Citation Report, JCE&M articles were cited 64,185 times in 2008.
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