MUNet:结合UNet和曼巴网络的精确脑肿瘤分割的新框架。

IF 2.1 4区 医学 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Frontiers in Computational Neuroscience Pub Date : 2025-01-29 eCollection Date: 2025-01-01 DOI:10.3389/fncom.2025.1513059
Lijuan Yang, Qiumei Dong, Da Lin, Chunfang Tian, Xinliang Lü
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引用次数: 0

摘要

脑肿瘤是人类的主要健康威胁之一,其复杂的病理特征和解剖结构使得准确的分割和检测至关重要。然而,现有的基于transformer和卷积神经网络(Convolutional Neural Networks, cnn)的模型在医学图像处理中仍然存在局限性。虽然变形金刚在捕获全局特征方面很精通,但它们的计算复杂度很高,需要大量的数据进行训练。另一方面,cnn在提取局部特征方面表现良好,但在处理全局信息时性能有限。为了解决这些问题,本文提出了一种新的网络框架MUNet,它结合了UNet和Mamba的优点,专门用于脑肿瘤分割。MUNet引入SD-SSM模块,通过选择性扫描和状态空间建模,有效捕获图像的全局和局部特征,显著提高分割精度。此外,我们设计了SD-Conv结构,在不增加模型参数的情况下减少了特征冗余,进一步提高了计算效率。最后,我们提出了一种结合mIoU损失、Dice损失和Boundary损失的新损失函数,从多个角度提高了分割重叠、相似度和边界精度。实验结果表明,在BraTS2020数据集上,MUNet增强肿瘤(ET)、全肿瘤(WT)和肿瘤核心(TC)的DSC值分别为0.835、0.915和0.823,Hausdorff95评分分别为2.421、3.755和6.437。在BraTS2018数据集上,MUNet的DSC值分别为0.815、0.901和0.815,Hausdorff95得分分别为4.389、6.243和6.152,均优于现有方法,取得了显著的性能提升。此外,当在独立的LGG数据集上进行验证时,MUNet显示出出色的泛化能力,证明了其在各种医学成像场景中的有效性。代码可在https://github.com/Dalin1977331/MUNet上获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
MUNet: a novel framework for accurate brain tumor segmentation combining UNet and mamba networks.

Brain tumors are one of the major health threats to humans, and their complex pathological features and anatomical structures make accurate segmentation and detection crucial. However, existing models based on Transformers and Convolutional Neural Networks (CNNs) still have limitations in medical image processing. While Transformers are proficient in capturing global features, they suffer from high computational complexity and require large amounts of data for training. On the other hand, CNNs perform well in extracting local features but have limited performance when handling global information. To address these issues, this paper proposes a novel network framework, MUNet, which combines the advantages of UNet and Mamba, specifically designed for brain tumor segmentation. MUNet introduces the SD-SSM module, which effectively captures both global and local features of the image through selective scanning and state-space modeling, significantly improving segmentation accuracy. Additionally, we design the SD-Conv structure, which reduces feature redundancy without increasing model parameters, further enhancing computational efficiency. Finally, we propose a new loss function that combines mIoU loss, Dice loss, and Boundary loss, which improves segmentation overlap, similarity, and boundary accuracy from multiple perspectives. Experimental results show that, on the BraTS2020 dataset, MUNet achieves DSC values of 0.835, 0.915, and 0.823 for enhancing tumor (ET), whole tumor (WT), and tumor core (TC), respectively, and Hausdorff95 scores of 2.421, 3.755, and 6.437. On the BraTS2018 dataset, MUNet achieves DSC values of 0.815, 0.901, and 0.815, with Hausdorff95 scores of 4.389, 6.243, and 6.152, all outperforming existing methods and achieving significant performance improvements. Furthermore, when validated on the independent LGG dataset, MUNet demonstrated excellent generalization ability, proving its effectiveness in various medical imaging scenarios. The code is available at https://github.com/Dalin1977331/MUNet.

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来源期刊
Frontiers in Computational Neuroscience
Frontiers in Computational Neuroscience MATHEMATICAL & COMPUTATIONAL BIOLOGY-NEUROSCIENCES
CiteScore
5.30
自引率
3.10%
发文量
166
审稿时长
6-12 weeks
期刊介绍: Frontiers in Computational Neuroscience is a first-tier electronic journal devoted to promoting theoretical modeling of brain function and fostering interdisciplinary interactions between theoretical and experimental neuroscience. Progress in understanding the amazing capabilities of the brain is still limited, and we believe that it will only come with deep theoretical thinking and mutually stimulating cooperation between different disciplines and approaches. We therefore invite original contributions on a wide range of topics that present the fruits of such cooperation, or provide stimuli for future alliances. We aim to provide an interactive forum for cutting-edge theoretical studies of the nervous system, and for promulgating the best theoretical research to the broader neuroscience community. Models of all styles and at all levels are welcome, from biophysically motivated realistic simulations of neurons and synapses to high-level abstract models of inference and decision making. While the journal is primarily focused on theoretically based and driven research, we welcome experimental studies that validate and test theoretical conclusions. Also: comp neuro
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