普通家鸦的遗传特征及系统发育分析。

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Muhammad Arbab Khan, Muhammad Latif, Muhammad Mansha, Tanveer Hussain, Yousef A Bin Jardan, Amira Metouekel, Musaab Dauelbait, Hanène Belkahia, Furhan Iqbal, Mourad Ben Said
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引用次数: 0

摘要

普通家鸦(Corvus splendens)具有出色的生态适应能力,使其能够在各大洲迅速扩展。然而,尽管其分布范围很广,但仍有必要进行遗传研究,以明确其进化历史和种群结构。本研究采用 DNA 条形码技术,重点研究线粒体基因细胞色素氧化酶亚单位 I(Cox1),该技术可有效进行物种鉴定和系统发育分析。在巴基斯坦旁遮普省的七个城市采集了 70 个白芨标本的血样:拉合尔、卡苏尔、锡亚尔科特、纳罗沃尔、帕克帕坦、古杰兰瓦拉和巴哈瓦尔布尔。对基因组 DNA 进行了提取,并利用 PCR 技术扩增了 COX1 基因的部分序列。对随机选取的 10 个标本中的 Cox1 标记进行测序,发现了 9 个不同的基因变异。种间分析将我们的白芨序列与 GenBank 中的各种 Corvus 物种定位在一起,而种内分析则发现了总共 15 个遗传变异。这些变体的核苷酸同一率在 98.7% 到 99.8% 之间,遗传距离在 0.002 到 0.013 之间。分析表明,白芨群体由一个单一的异质支系组成,变体来自多个国家,包括巴基斯坦、坦桑尼亚、尼泊尔、南非、马来西亚、斯里兰卡、孟加拉国、肯尼亚、澳大利亚和新加坡。这项研究极大地增强了我们对白芨芨草种群遗传多样性和进化关系的了解,凸显了遗传研究为保护策略提供信息的必要性。采用先进的分子技术和更广泛的地理取样进行进一步研究对于评估这一适应性强的物种的遗传多样性和种群动态至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Genetic characterization and phylogenetic analysis of common house crows (Corvus splendens).

Genetic characterization and phylogenetic analysis of common house crows (Corvus splendens).

Genetic characterization and phylogenetic analysis of common house crows (Corvus splendens).

Genetic characterization and phylogenetic analysis of common house crows (Corvus splendens).

The Common House Crow (Corvus splendens) exhibits remarkable ecological adaptability, enabling its rapid expansion across continents. However, despite its wide distribution, there is a need for genetic studies to clarify its evolutionary history and population structure. This research employs DNA barcoding, focusing on the mitochondrial gene cytochrome oxidase subunit I (Cox1), which is effective for species identification and phylogenetic analysis. Blood samples were collected from 70 C. splendens specimens across seven cities in Punjab, Pakistan: Lahore, Kasur, Sialkot, Narowal, Pakpattan, Gujranwala, and Bahawalpur. Genomic DNA extraction was performed, and a partial sequence of the COX1 gene was amplified using PCR techniques. Sequencing of the Cox1 marker from 10 randomly selected specimens revealed nine distinct genetic variants. Interspecific analysis positioned our C. splendens sequences alongside various Corvus species available in GenBank, while intraspecific analysis identified a total of 15 genetic variants. These variants showed nucleotide identity rates ranging from 98.7 to 99.8%, with genetic distances between 0.002 and 0.013. The analysis indicated that the C. splendens group consists of a single heterogeneous clade with variants from multiple countries, including Pakistan, Tanzania, Nepal, South Africa, Malaysia, Sri Lanka, Bangladesh, Kenya, Australia, and Singapore. This study significantly enhances our understanding of genetic diversity and evolutionary relationships within C. splendens populations, highlighting the necessity of genetic research to inform conservation strategies. Further research employing advanced molecular techniques and broader geographic sampling is essential to assess the genetic diversity and population dynamics of this adaptable species.

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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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