{"title":"使用 REShAPE 对小鼠 RPE 形态异质性进行分类:基于人工智能的图像分析工具","authors":"Davide Ortolan, Dominik Reichert, Huirong Li, Dylan Walmsley, Ruchi Sharma, Kapil Bharti","doi":"10.1007/978-3-031-76550-6_65","DOIUrl":null,"url":null,"abstract":"<p><p>Retinal degenerative diseases caused by retinal pigment epithelium (RPE) dysfunction affect specific areas of the retina. Regions of molecular and phenotypic RPE heterogeneity have been described in the human eye and are thought to underlie geographic differential RPE sensitivity to degeneration. The mouse is one of the most widely used models to study retinal degeneration. A deeper understanding of mouse RPE heterogeneity can facilitate the interpretation of the observed phenotypes in models of retinal degeneration. In this study, we used an AI-based image analysis algorithm (REShAPE) to generate morphometric maps of RPE flatmounts in young adult mice (2 months old). Using cell area, we distinguished three concentric subpopulations of phenotypic heterogeneity. Treatment with sodium iodate, a widely used oxidative agent to model retinal degenerations, induced RPE atrophy of the two centermost subpopulations. RPE morphometric analysis could prove useful when analyzing animal models of retinal degeneration.</p>","PeriodicalId":7270,"journal":{"name":"Advances in experimental medicine and biology","volume":"1468 ","pages":"395-399"},"PeriodicalIF":0.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Classifying Mouse RPE Morphometric Heterogeneity Using REShAPE: An AI-Based Image Analysis Tool.\",\"authors\":\"Davide Ortolan, Dominik Reichert, Huirong Li, Dylan Walmsley, Ruchi Sharma, Kapil Bharti\",\"doi\":\"10.1007/978-3-031-76550-6_65\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Retinal degenerative diseases caused by retinal pigment epithelium (RPE) dysfunction affect specific areas of the retina. Regions of molecular and phenotypic RPE heterogeneity have been described in the human eye and are thought to underlie geographic differential RPE sensitivity to degeneration. The mouse is one of the most widely used models to study retinal degeneration. A deeper understanding of mouse RPE heterogeneity can facilitate the interpretation of the observed phenotypes in models of retinal degeneration. In this study, we used an AI-based image analysis algorithm (REShAPE) to generate morphometric maps of RPE flatmounts in young adult mice (2 months old). Using cell area, we distinguished three concentric subpopulations of phenotypic heterogeneity. Treatment with sodium iodate, a widely used oxidative agent to model retinal degenerations, induced RPE atrophy of the two centermost subpopulations. RPE morphometric analysis could prove useful when analyzing animal models of retinal degeneration.</p>\",\"PeriodicalId\":7270,\"journal\":{\"name\":\"Advances in experimental medicine and biology\",\"volume\":\"1468 \",\"pages\":\"395-399\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Advances in experimental medicine and biology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1007/978-3-031-76550-6_65\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advances in experimental medicine and biology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1007/978-3-031-76550-6_65","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
Classifying Mouse RPE Morphometric Heterogeneity Using REShAPE: An AI-Based Image Analysis Tool.
Retinal degenerative diseases caused by retinal pigment epithelium (RPE) dysfunction affect specific areas of the retina. Regions of molecular and phenotypic RPE heterogeneity have been described in the human eye and are thought to underlie geographic differential RPE sensitivity to degeneration. The mouse is one of the most widely used models to study retinal degeneration. A deeper understanding of mouse RPE heterogeneity can facilitate the interpretation of the observed phenotypes in models of retinal degeneration. In this study, we used an AI-based image analysis algorithm (REShAPE) to generate morphometric maps of RPE flatmounts in young adult mice (2 months old). Using cell area, we distinguished three concentric subpopulations of phenotypic heterogeneity. Treatment with sodium iodate, a widely used oxidative agent to model retinal degenerations, induced RPE atrophy of the two centermost subpopulations. RPE morphometric analysis could prove useful when analyzing animal models of retinal degeneration.
期刊介绍:
Advances in Experimental Medicine and Biology provides a platform for scientific contributions in the main disciplines of the biomedicine and the life sciences. This series publishes thematic volumes on contemporary research in the areas of microbiology, immunology, neurosciences, biochemistry, biomedical engineering, genetics, physiology, and cancer research. Covering emerging topics and techniques in basic and clinical science, it brings together clinicians and researchers from various fields.