灵活和经济高效的深度学习加速多参数松弛测量使用相位循环bSSFP。

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Florian Birk, Lucas Mahler, Julius Steiglechner, Qi Wang, Klaus Scheffler, Rahel Heule
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引用次数: 0

摘要

为了加速定量磁共振成像(qMRI)的临床应用,不仅需要能够快速获取的框架,还需要在参数映射方面具有灵活性、成本效益和高精度。在这项研究中,比较了基于前馈深度神经网络(DNN)和基于迭代拟合的框架,用于基于相位循环平衡稳态自由进动(pc-bSSFP)成像的多参数弛豫测量(MP)。在健康受试者的大脑组织中,在计算机上和体内评估了监督dnn (SVNN)、自我监督物理通知dnn (PINN)和称为运动不敏感快速配置松弛测量(MIRACLE)的迭代拟合框架的性能,包括模拟噪声的蒙特卡罗采样。dnn在三种不同的硅参数分布和不同的信噪比下进行训练。与SVNN相比,PINN框架将物理知识整合到训练过程中,确保了更一致的推理,并增加了训练数据分布的鲁棒性。此外,利用底层复值MR数据的全部信息的dnn证明了将数据采集速度提高3倍的能力。使用深度神经网络的全脑松弛测量被证明是有效的和自适应的,这表明低成本的深度神经网络再训练的潜力。这项工作强调了计算机DNN MP-qMRI管道在快速数据生成和DNN训练方面的优势,而不需要大量的字典生成、较长的参数推理时间或长时间的数据采集,突出了MP-qMRI轻量级机器学习应用的灵活性和快速性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Flexible and cost-effective deep learning for accelerated multi-parametric relaxometry using phase-cycled bSSFP.

To accelerate the clinical adoption of quantitative magnetic resonance imaging (qMRI), frameworks are needed that not only allow for rapid acquisition, but also flexibility, cost efficiency, and high accuracy in parameter mapping. In this study, feed-forward deep neural network (DNN)- and iterative fitting-based frameworks are compared for multi-parametric (MP) relaxometry based on phase-cycled balanced steady-state free precession (pc-bSSFP) imaging. The performance of supervised DNNs (SVNN), self-supervised physics-informed DNNs (PINN), and an iterative fitting framework termed motion-insensitive rapid configuration relaxometry (MIRACLE) was evaluated in silico and in vivo in brain tissue of healthy subjects, including Monte Carlo sampling to simulate noise. DNNs were trained on three distinct in silico parameter distributions and at different signal-to-noise-ratios. The PINN framework, which incorporates physical knowledge into the training process, ensured more consistent inference and increased robustness to training data distribution compared to the SVNN. Furthermore, DNNs utilizing the full information of the underlying complex-valued MR data demonstrated ability to accelerate the data acquisition by a factor of 3. Whole-brain relaxometry using DNNs proved to be effective and adaptive, suggesting the potential for low-cost DNN retraining. This work emphasizes the advantages of in silico DNN MP-qMRI pipelines for rapid data generation and DNN training without extensive dictionary generation, long parameter inference times, or prolonged data acquisition, highlighting the flexible and rapid nature of lightweight machine learning applications for MP-qMRI.

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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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