{"title":"金属有机骨架中Fe3+, Al3+, Cr3+虚拟原子模型的开发与应用","authors":"Dusanka Golo, Mårten S G Ahlquist, Hao Su","doi":"10.1021/acsomega.4c09177","DOIUrl":null,"url":null,"abstract":"<p><p>Various metal-organic frameworks (MOFs) containing trivalent cations (such as Fe<sup>3+</sup>, Al<sup>3+</sup>, and Cr<sup>3+</sup>) have been reported and have shown great potential in applications. However, the high structural diversity and strong electronic interactions between metal centers and their ligands make the molecular dynamics simulations of MOFs challenging. In this work, we developed new dummy atom models for Fe<sup>3+</sup>, Al<sup>3+</sup>, and Cr<sup>3+</sup> cations, which can be used in classical molecular dynamics simulations of MOFs. In our models, the correct solvation free energies and metal-ligand distances can be simultaneously reproduced. Furthermore, the usefulness and transferability of our models were validated using the commonly studied MIL-100(M) (M = Fe<sup>3+</sup>, Al<sup>3+</sup>, Cr<sup>3+</sup>) and MIL-88B(Fe<sup>3+</sup>) systems. Our developed models offer a valuable tool for simulating complex systems containing Fe<sup>3+</sup>, Al<sup>3+</sup>, and Cr<sup>3+</sup> cations with octahedral coordination structures.</p>","PeriodicalId":22,"journal":{"name":"ACS Omega","volume":"10 4","pages":"3801-3807"},"PeriodicalIF":4.3000,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11800152/pdf/","citationCount":"0","resultStr":"{\"title\":\"Development and Application of Fe<sup>3+</sup>, Al<sup>3+</sup>, Cr<sup>3+</sup> Dummy Atom Models for Metal-Organic Frameworks.\",\"authors\":\"Dusanka Golo, Mårten S G Ahlquist, Hao Su\",\"doi\":\"10.1021/acsomega.4c09177\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Various metal-organic frameworks (MOFs) containing trivalent cations (such as Fe<sup>3+</sup>, Al<sup>3+</sup>, and Cr<sup>3+</sup>) have been reported and have shown great potential in applications. However, the high structural diversity and strong electronic interactions between metal centers and their ligands make the molecular dynamics simulations of MOFs challenging. In this work, we developed new dummy atom models for Fe<sup>3+</sup>, Al<sup>3+</sup>, and Cr<sup>3+</sup> cations, which can be used in classical molecular dynamics simulations of MOFs. In our models, the correct solvation free energies and metal-ligand distances can be simultaneously reproduced. Furthermore, the usefulness and transferability of our models were validated using the commonly studied MIL-100(M) (M = Fe<sup>3+</sup>, Al<sup>3+</sup>, Cr<sup>3+</sup>) and MIL-88B(Fe<sup>3+</sup>) systems. Our developed models offer a valuable tool for simulating complex systems containing Fe<sup>3+</sup>, Al<sup>3+</sup>, and Cr<sup>3+</sup> cations with octahedral coordination structures.</p>\",\"PeriodicalId\":22,\"journal\":{\"name\":\"ACS Omega\",\"volume\":\"10 4\",\"pages\":\"3801-3807\"},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2025-01-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11800152/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Omega\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1021/acsomega.4c09177\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/2/4 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Omega","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1021/acsomega.4c09177","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/2/4 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Development and Application of Fe3+, Al3+, Cr3+ Dummy Atom Models for Metal-Organic Frameworks.
Various metal-organic frameworks (MOFs) containing trivalent cations (such as Fe3+, Al3+, and Cr3+) have been reported and have shown great potential in applications. However, the high structural diversity and strong electronic interactions between metal centers and their ligands make the molecular dynamics simulations of MOFs challenging. In this work, we developed new dummy atom models for Fe3+, Al3+, and Cr3+ cations, which can be used in classical molecular dynamics simulations of MOFs. In our models, the correct solvation free energies and metal-ligand distances can be simultaneously reproduced. Furthermore, the usefulness and transferability of our models were validated using the commonly studied MIL-100(M) (M = Fe3+, Al3+, Cr3+) and MIL-88B(Fe3+) systems. Our developed models offer a valuable tool for simulating complex systems containing Fe3+, Al3+, and Cr3+ cations with octahedral coordination structures.
ACS OmegaChemical Engineering-General Chemical Engineering
CiteScore
6.60
自引率
4.90%
发文量
3945
审稿时长
2.4 months
期刊介绍:
ACS Omega is an open-access global publication for scientific articles that describe new findings in chemistry and interfacing areas of science, without any perceived evaluation of immediate impact.