石斛萜类合成酶基因家族的鉴定与表达分析

IF 3.5 2区 农林科学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Lei Li, Jie Liu, Di Wu, Qingjie Fan, Yongxia Zhao, Xingdong Wu, Daopeng Tan, Yuqi He, Lin Qin
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引用次数: 0

摘要

萜类合成酶(Terpenoid synthase, TPS)是植物中催化萜类合成的重要酶。然而,TPS基因家族及其在石斛不同生长阶段的表达模式尚不清楚。本研究旨在利用全基因组测序技术对TPS家族成员进行系统鉴定和分析。结果鉴定出50个TPS基因家族成员,预测分子量在14,531 ~ 162,002 Da之间。在石斛中检测到TPS-a、TPS-b、TPS-c和TPS-e/f亚家族。利用UPLC-Q/TOF-MS技术对1年生和3年生石斛茎中的倍半萜类化合物进行了分析。倍半萜类化合物的含量,包括树斛素和树斛苷A,随着植物年龄的增长而增加。这种含量的增加可归因于倍半萜烯合成酶的上调,这一假设通过转录组测序、qRT-PCR和分子对接得到了验证。随着时间的推移,结果表明倍半萜化合物可能与TPS基因一起调节石斛的倍半萜合成。推动石斛向食品领域发展。有利于石斛资源的合理开发利用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Identification and Expression Analysis of the Terpenoid Synthase Gene Family in Dendrobium nobile

Identification and Expression Analysis of the Terpenoid Synthase Gene Family in Dendrobium nobile

Terpenoid synthase (TPS) is a crucial enzyme catalyzing terpenoid synthesis in plants. However, the TPS gene family and its expression patterns in different growth stages of Dendrobium nobile remain unexplored. This study aims to systematically identify and analyze TPS family members using whole genome sequencing. Results revealed the identification of 50 TPS gene family members, with predicted molecular weights ranging from 14,531 to 162,002 Da. Subfamilies TPS-a, TPS-b, TPS-c, and TPS-e/f were detected in Dendrobium nobile. Furthermore, UPLC-Q/TOF-MS technology was utilized to analyze sesquiterpenoid compounds in the stems of 1-year-old and 3-year-old Dendrobium nobile. The content of sesquiterpenoid compounds, including dendroxine and dendronobiloside A, increased with plant age. That increase in content can be attributed to the upregulation of sesquiterpene synthase, a hypothesis validated through transcriptome sequencing, qRT-PCR, and molecular docking. The results over time suggest that sesquiterpenoid compounds may play a role in regulating sesquiterpene synthesis in Dendrobium nobile in conjunction with TPS genes. We promote the development of Dendrobium nobile into the food field. It is conducive to the rational development and utilization of Dendrobium nobile.

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来源期刊
Journal of Food Biochemistry
Journal of Food Biochemistry 生物-生化与分子生物学
CiteScore
7.80
自引率
5.00%
发文量
488
审稿时长
3.6 months
期刊介绍: The Journal of Food Biochemistry publishes fully peer-reviewed original research and review papers on the effects of handling, storage, and processing on the biochemical aspects of food tissues, systems, and bioactive compounds in the diet. Researchers in food science, food technology, biochemistry, and nutrition, particularly based in academia and industry, will find much of great use and interest in the journal. Coverage includes: -Biochemistry of postharvest/postmortem and processing problems -Enzyme chemistry and technology -Membrane biology and chemistry -Cell biology -Biophysics -Genetic expression -Pharmacological properties of food ingredients with an emphasis on the content of bioactive ingredients in foods Examples of topics covered in recently-published papers on two topics of current wide interest, nutraceuticals/functional foods and postharvest/postmortem, include the following: -Bioactive compounds found in foods, such as chocolate and herbs, as they affect serum cholesterol, diabetes, hypertension, and heart disease -The mechanism of the ripening process in fruit -The biogenesis of flavor precursors in meat -How biochemical changes in farm-raised fish are affecting processing and edible quality
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