欧洲野牛的一种致命疾病——posthitis是由它的基因组有条件地决定的。

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Sazia Kunvar, Sylwia Czarnomska, Cino Pertoldi, Astrid V Stronen, Iwona Ruczyńska, Małgorzata Tokarska
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引用次数: 0

摘要

Posthitis是雄性欧洲野牛(bison bonasus)的一种无法治愈的致命疾病,被认为是对标志性物种生存的主要威胁之一。在过去30年中,已经进行了多次尝试,以确定感染源和主要病原体。研究表明,在为牛(Bos taurus)开发的工具揭示了可能与其发生相关的基因组区域后,该疾病可能具有遗传背景。在这项研究中,我们对野牛的10条染色体(1、9、12、13、15、23、25、26、29和X)上的74个区域进行了深度覆盖靶向测序,以寻找物种特异性的单核苷酸多态性(SNP)标记,这些标记可以帮助解释疾病的机制,并用于检测posthitis的易感性。根据p值小于0.005且比值比(OR)大于1对关联结果进行排序。我们获得了30个符合这些要求的SNP标记,都位于25号染色体上。然而,研究中发现的snp均未与Bonferroni校正后的后阴炎发生显著相关。posthitis的条件性质和“假阴性”采样是调查这种疾病的主要困难,我们建议进行复杂的基因组和环境因素关联分析,最终可以解释posthitis令人费解的病因,并有助于减轻这种对欧洲野牛的威胁。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A lethal disease of the European bison - posthitis is conditionally determined by its genomics.

A lethal disease of the European bison - posthitis is conditionally determined by its genomics.

A lethal disease of the European bison - posthitis is conditionally determined by its genomics.

A lethal disease of the European bison - posthitis is conditionally determined by its genomics.

Posthitis is an incurable lethal disease of males of the European bison (Bison bonasus), regarded to be one of the major threats to the survival of the iconic species. Multiple attempts have been undertaken over the last 30 years to identify a source of infection and a primary pathogen. Studies indicated the disease could have a genetic background after tools developed for cattle (Bos taurus) revealed genomic regions that could be associated with its occurrence. In this study, we applied deep coverage targeted sequencing to 74 regions on 10 of the bison's chromosomes (1, 9, 12, 13, 15, 23, 25, 26, 29, and X) in search for species-specific single nucleotide polymorphism (SNP) markers that could help to explain the mechanism of the disease and be used to test for posthitis susceptibility. The association results were ranked based on p-values lower than 0.005 and odds ratios (OR) higher than 1. We obtained 30 SNP markers that met these requirements, all located on chromosome 25. However, none of the SNPs found in the study was significantly associated with posthitis occurrence after Bonferroni correction. The conditional nature of posthitis and 'false negative' sampling represent major difficulties in investigating this disease, and we recommend a complex genomic and environmental factors association assay that could eventually explain the puzzling etiology of posthitis and help mitigate this threat to the European bison.

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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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