基于网络药理学、分子对接、实验验证研究清藻九肺汤抗肺癌机制。

IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Xiaoli Wen, Fangyan Cai, Min Tan, Ge Zhang, Xiang Zhang, Lihua Xie, Ziheng Yao, Hongning Liu
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引用次数: 0

摘要

背景:肺癌(Lung cancer, LC)是世界上最常见的癌症之一,其发病率和死亡率在各类癌症中均居首位,对人类健康构成严重威胁。清藻九肺汤(QD)已被应用于临床治疗肺癌,但其作用机制尚不清楚。目的:本研究旨在通过网络药理学、分子对接、分子动力学模拟(MDS)和动物实验验证等手段,阐明QD治疗LC的潜在药理机制。方法:利用TCMSP和HREB数据库筛选QD的有效成分,并利用网络药理学方法预测其潜在靶点。从Genecards、OMIM和TTD数据库中鉴定出LC的相关靶点。将QD和LC之间的相交靶点导入STRING 12.0数据库和Cytoscape 3.10.0软件,创建蛋白蛋白相互作用(PPI)网络图,利用DAVID数据库进行基因本体(GO)功能分析和京都基因与基因组百科全书(KEGG)通路富集分析,确定核心活性成分和关键靶点。采用分子对接方法评估核心活性成分与肺癌关键靶点的结合亲和力,采用MDS方法评估靶活性成分复合物的稳定性。通过体内肺癌模型验证中药中药饮片的治疗作用,并通过Western blot分析证实中药中药饮片治疗肺癌的药理机制。结果:网络药理分析鉴定出9个核心成分和9个关键靶点。GO和KEGG分析共揭示了185条信号通路,其中PI3K-Akt信号通路和MAPK信号通路是两条最显著富集的信号通路。分子对接结果表明,9个核心组分与9个关键靶点均表现出显著的结合活性(结合能< -5 kcal/mol)。MDS研究进一步模拟并证实了靶标与活性成分之间强而稳定的相互作用。在体内肺癌模型中,QD显著抑制肿瘤生长,Western blot分析表明,QD通过抑制MAPK信号通路中ERK、JNK和p38的磷酸化来发挥其对肺癌的治疗作用。结论:本实验研究发现,QD可通过多组分、多靶点、多途径显著抑制肺癌的生长,为QD靶向肺癌新药的开发和临床应用提供基础。此外,它为中医抗肿瘤研究提供了宝贵的见解,并有助于通过现代科学的视角更全面地解释中医原理。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The Anti-lung Cancer Mechanism of Qingzao Jiufei Decoction was Studied based on Network Pharmacology, Molecular Docking, and Experimental Verification.

Background: Lung cancer (LC) is one of the most common cancers in the world, with both its incidence and mortality rates ranking at the top position among all types of cancers, posing a serious threat to human health. Qingzao Jiufei Decoction (QD) has been used clinically to treat lung cancer, but its mechanism of action remains unclear.

Objective: This study aims to elucidate the potential pharmacological mechanisms of QD in treating LC through network pharmacology, molecular docking, molecular dynamics simulation (MDS), and animal experiment validation.

Methods: Active components of QD were screened utilizing the TCMSP and HREB databases, and potential targets were predicted using network pharmacology methods. Relevant targets for LC were identified from the Genecards, OMIM, and TTD databases. Intersecting targets between QD and LC were imported into the STRING 12.0 database and Cytoscape 3.10.0 software to create proteinprotein interaction (PPI) network diagrams, and Gene Ontology (GO) function analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis were conducted through using the DAVID database to identify core active components and key targets. Molecular docking was employed to assess the binding affinity of core active components with key targets in lung cancer, and MDS was used to evaluate the stability of the target-active component complexes. An in vivo lung cancer model was used to verify the therapeutic effects of QD, and Western blot analysis was used to confirm the pharmacological mechanisms of QD in treating lung cancer.

Results: Network pharmacology analysis has identified 9 core components and 9 key targets. GO and KEGG analyses have revealed a total of 185 signaling pathways, with the PI3K-Akt signaling pathway and MAPK signaling pathway being the two most significantly enriched pathways. Molecular docking results showed that all 9 core components and 9 key targets exhibited significant binding activity (binding energy < -5 kcal/mol). MDS study further simulated and confirmed strong and stable interactions between targets and active components. In an in vivo lung cancer model, QD significantly inhibited tumor growth, while Western blot analysis demonstrated that QD exerted its therapeutic effects on lung cancer by inhibiting the phosphorylation of ERK, JNK, and p38 in the MAPK signaling pathway.

Conclusion: This experimental study found that QD can significantly inhibit the growth of lung cancer through a multifaceted approach involving various components, targets, and pathways, providing a foundation for the development and clinical application of new drugs targeting lung cancer for QD. Furthermore, it offers valuable insights into anti-tumor research with Traditional Chinese Medicine (TCM) and facilitates a more comprehensive interpretation of TCM principles through the lens of modern science.

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来源期刊
CiteScore
3.10
自引率
5.60%
发文量
327
审稿时长
7.5 months
期刊介绍: Combinatorial Chemistry & High Throughput Screening (CCHTS) publishes full length original research articles and reviews/mini-reviews dealing with various topics related to chemical biology (High Throughput Screening, Combinatorial Chemistry, Chemoinformatics, Laboratory Automation and Compound management) in advancing drug discovery research. Original research articles and reviews in the following areas are of special interest to the readers of this journal: Target identification and validation Assay design, development, miniaturization and comparison High throughput/high content/in silico screening and associated technologies Label-free detection technologies and applications Stem cell technologies Biomarkers ADMET/PK/PD methodologies and screening Probe discovery and development, hit to lead optimization Combinatorial chemistry (e.g. small molecules, peptide, nucleic acid or phage display libraries) Chemical library design and chemical diversity Chemo/bio-informatics, data mining Compound management Pharmacognosy Natural Products Research (Chemistry, Biology and Pharmacology of Natural Products) Natural Product Analytical Studies Bipharmaceutical studies of Natural products Drug repurposing Data management and statistical analysis Laboratory automation, robotics, microfluidics, signal detection technologies Current & Future Institutional Research Profile Technology transfer, legal and licensing issues Patents.
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